Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq658 170 4e-40 seq657 170 4e-40 >seq658 Length=722326 Score = 170 bits (188), Expect = 4e-40 Identities = 190/250 (76%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGC 128 || ||||||||||||||||||||||| ||||||||||| || | | |||||| | || Sbjct 206409 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCATTATCGCCTGAATACTGTTGC 206350 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 |||||||||| ||||||||| | |||||| || ||||||| | | | || |||||| Sbjct 206349 ATGGAATAATGGAATAGGACCTT-GGTTCTGTTCTGTTGGTCTTCGGAATCGAGGTAATG 206291 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||| ||||| | ||||| | |||| | | |||||||||||||||||| Sbjct 206290 ATTAAGAGGGACGGACGGGGACATTAGTACTGCGGCGATAGAGGTGAAATTCTTGGACCG 206231 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 | ||||||||| |||||||| || |||| | |||||||||||||| |||||| Sbjct 206230 CCGCATGACTAACTAAAGCGAAAGCATTTGTCAAGAACGTTTTCATTAATCA-AGAACGA 206172 Query 309 AAGTTAGGGG 318 ||||||| || Sbjct 206171 AAGTTAGAGG 206162 >seq657 Length=2482312 Score = 170 bits (188), Expect = 4e-40 Identities = 190/250 (76%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC--GAATACATTAGC 128 || ||||||||||||||||||||||| ||||||||||| || | | |||||| | || Sbjct 1123 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCATTATCGCCTGAATACTGTTGC 1182 Query 129 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATG 188 |||||||||| ||||||||| | |||||| || ||||||| | | | || |||||| Sbjct 1183 ATGGAATAATGGAATAGGACCTT-GGTTCTGTTCTGTTGGTCTTCGGAATCGAGGTAATG 1241 Query 189 ATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 248 ||||| ||||| | ||||| | |||| | | |||||||||||||||||| Sbjct 1242 ATTAAGAGGGACGGACGGGGACATTAGTACTGCGGCGATAGAGGTGAAATTCTTGGACCG 1301 Query 249 ATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGA 308 | ||||||||| |||||||| || |||| | |||||||||||||| |||||| Sbjct 1302 CCGCATGACTAACTAAAGCGAAAGCATTTGTCAAGAACGTTTTCATTAATCA-AGAACGA 1360 Query 309 AAGTTAGGGG 318 ||||||| || Sbjct 1361 AAGTTAGAGG 1370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915187901056