Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq1255 352 5e-95
seq657 352 5e-95
seq191 352 5e-95
seq471 336 4e-90
seq380 336 4e-90
>seq1255
Length=2071
Score = 352 bits (390), Expect = 5e-95
Identities = 258/298 (87%), Gaps = 5/298 (2%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGAC---GGTCATCAGTAGGGTAAAACTAACCTGTC 57
|||| ||| ||||| | || | |||| | | |||||||||||||||||||||||||
Sbjct 1770 TACTGAGCAGAATTTCTATCGTAACGACATGGTTGATCAGTAGGGTAAAACTAACCTGTC 1711
Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1710 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGG 1651
Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177
|||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1650 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 1591
Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 1590 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 1531
Query 238 CCTCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||||| | | | | | |||||||||||||||| ||||| || ||||||
Sbjct 1530 CTTCAAACTCGGAAACGTGCAAAAGGATCGATAGGCCGAGCTTTCGCTGTCCGTATTC 1473
>seq657
Length=2482312
Score = 352 bits (390), Expect = 5e-95
Identities = 258/298 (87%), Gaps = 5/298 (2%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGAC---GGTCATCAGTAGGGTAAAACTAACCTGTC 57
|||| ||| ||||| | || | |||| | | |||||||||||||||||||||||||
Sbjct 7876 TACTGAGCAGAATTTCTATCGTAACGACATGGTTGATCAGTAGGGTAAAACTAACCTGTC 7817
Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7816 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGG 7757
Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177
|||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 7756 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 7697
Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 7696 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 7637
Query 238 CCTCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||||| | | | | | |||||||||||||||| ||||| || ||||||
Sbjct 7636 CTTCAAACTCGGAAACGTGCAAAAGGATCGATAGGCCGAGCTTTCGCTGTCCGTATTC 7579
>seq191
Length=200012
Score = 352 bits (390), Expect = 5e-95
Identities = 258/298 (87%), Gaps = 5/298 (2%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGAC---GGTCATCAGTAGGGTAAAACTAACCTGTC 57
|||| ||| ||||| | || | |||| | | |||||||||||||||||||||||||
Sbjct 84137 TACTGAGCAGAATTTCTATCGTAACGACATGGTTGATCAGTAGGGTAAAACTAACCTGTC 84196
Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 84197 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGG 84256
Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177
|||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 84257 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 84316
Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 84317 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 84376
Query 238 CCTCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||||| | | | | | |||||||||||||||| ||||| || ||||||
Sbjct 84377 CTTCAAACTCGGAAACGTGCAAAAGGATCGATAGGCCGAGCTTTCGCTGTCCGTATTC 84434
>seq471
Length=29810
Score = 336 bits (372), Expect = 4e-90
Identities = 231/261 (89%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 27300 ATAAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 27241
Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152
|| ||||||||||||| || || || |||||| || |||||||||||||||||||
Sbjct 27240 AGCGGGTGAACAATCCGACATTTTGAGACTTCTGCGTCTCAATGATAGGAAGAGCCGACA 27181
Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 27180 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 27121
Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272
||||||||||||||| ||||||||||| || ||| || |||||||||||||||||
Sbjct 27120 GTGGTAACTTTTCTGTCACCTCTAGCCAGAACTTTTCTGGACTTAAAGGATCGATAGGCC 27061
Query 273 ACACTTTCATGGTTTGTATTC 293
| ||||| ||| ||||||
Sbjct 27060 ATGCTTTCGCAGTTCGTATTC 27040
Score = 327 bits (362), Expect = 2e-87
Identities = 229/261 (88%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 21421 ATAAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 21362
Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152
|| ||||||||||||| || || || |||||| || |||||||||||||||||||
Sbjct 21361 AGCGGGTGAACAATCCGACATTTTAAGACTTCTGCGTCTCAATGATAGGAAGAGCCGACA 21302
Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21301 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 21242
Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272
||||||||||||||| |||||||| || || || || |||||||||||||||||
Sbjct 21241 GTGGTAACTTTTCTGTCACCTCTAACCAGAACCTTTCTGGATTTAAAGGATCGATAGGCC 21182
Query 273 ACACTTTCATGGTTTGTATTC 293
| ||||| ||| ||||||
Sbjct 21181 ATGCTTTCGCAGTTCGTATTC 21161
>seq380
Length=884649
Score = 336 bits (372), Expect = 4e-90
Identities = 231/261 (89%), Gaps = 0/261 (0%)
Strand=Plus/Minus
Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 21237 ATAAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 21178
Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152
|| ||||||||||||| || || || |||||| || |||||||||||||||||||
Sbjct 21177 AGCGGGTGAACAATCCGACATTTTAAGACTTCTGCGTCTCAATGATAGGAAGAGCCGACA 21118
Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21117 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 21058
Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272
||||||||||||||| ||||||||||| || ||| || |||||||||||||||||
Sbjct 21057 GTGGTAACTTTTCTGTCACCTCTAGCCAGAACTTTTCTGGACTTAAAGGATCGATAGGCC 20998
Query 273 ACACTTTCATGGTTTGTATTC 293
| ||||| ||| ||||||
Sbjct 20997 ATGCTTTCGCAGTTCGTATTC 20977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854388704832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |