Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1255 352 5e-95 seq657 352 5e-95 seq191 352 5e-95 seq471 336 4e-90 seq380 336 4e-90 >seq1255 Length=2071 Score = 352 bits (390), Expect = 5e-95 Identities = 258/298 (87%), Gaps = 5/298 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC---GGTCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| ||||| | || | |||| | | ||||||||||||||||||||||||| Sbjct 1770 TACTGAGCAGAATTTCTATCGTAACGACATGGTTGATCAGTAGGGTAAAACTAACCTGTC 1711 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1710 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGG 1651 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1650 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 1591 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 1590 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 1531 Query 238 CCTCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||||| | | | | | |||||||||||||||| ||||| || |||||| Sbjct 1530 CTTCAAACTCGGAAACGTGCAAAAGGATCGATAGGCCGAGCTTTCGCTGTCCGTATTC 1473 >seq657 Length=2482312 Score = 352 bits (390), Expect = 5e-95 Identities = 258/298 (87%), Gaps = 5/298 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC---GGTCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| ||||| | || | |||| | | ||||||||||||||||||||||||| Sbjct 7876 TACTGAGCAGAATTTCTATCGTAACGACATGGTTGATCAGTAGGGTAAAACTAACCTGTC 7817 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7816 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGG 7757 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 7756 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 7697 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 7696 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 7637 Query 238 CCTCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||||| | | | | | |||||||||||||||| ||||| || |||||| Sbjct 7636 CTTCAAACTCGGAAACGTGCAAAAGGATCGATAGGCCGAGCTTTCGCTGTCCGTATTC 7579 >seq191 Length=200012 Score = 352 bits (390), Expect = 5e-95 Identities = 258/298 (87%), Gaps = 5/298 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC---GGTCATCAGTAGGGTAAAACTAACCTGTC 57 |||| ||| ||||| | || | |||| | | ||||||||||||||||||||||||| Sbjct 84137 TACTGAGCAGAATTTCTATCGTAACGACATGGTTGATCAGTAGGGTAAAACTAACCTGTC 84196 Query 58 TCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTAC 117 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 84197 TCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGG 84256 Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct 84257 CGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGC 84316 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 84317 TATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTG 84376 Query 238 CCTCAAATTTCG--AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||||| | | | | | |||||||||||||||| ||||| || |||||| Sbjct 84377 CTTCAAACTCGGAAACGTGCAAAAGGATCGATAGGCCGAGCTTTCGCTGTCCGTATTC 84434 >seq471 Length=29810 Score = 336 bits (372), Expect = 4e-90 Identities = 231/261 (89%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 27300 ATAAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 27241 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 || ||||||||||||| || || || |||||| || ||||||||||||||||||| Sbjct 27240 AGCGGGTGAACAATCCGACATTTTGAGACTTCTGCGTCTCAATGATAGGAAGAGCCGACA 27181 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 27180 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 27121 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| ||||||||||| || ||| || ||||||||||||||||| Sbjct 27120 GTGGTAACTTTTCTGTCACCTCTAGCCAGAACTTTTCTGGACTTAAAGGATCGATAGGCC 27061 Query 273 ACACTTTCATGGTTTGTATTC 293 | ||||| ||| |||||| Sbjct 27060 ATGCTTTCGCAGTTCGTATTC 27040 Score = 327 bits (362), Expect = 2e-87 Identities = 229/261 (88%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 21421 ATAAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 21362 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 || ||||||||||||| || || || |||||| || ||||||||||||||||||| Sbjct 21361 AGCGGGTGAACAATCCGACATTTTAAGACTTCTGCGTCTCAATGATAGGAAGAGCCGACA 21302 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21301 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 21242 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| |||||||| || || || || ||||||||||||||||| Sbjct 21241 GTGGTAACTTTTCTGTCACCTCTAACCAGAACCTTTCTGGATTTAAAGGATCGATAGGCC 21182 Query 273 ACACTTTCATGGTTTGTATTC 293 | ||||| ||| |||||| Sbjct 21181 ATGCTTTCGCAGTTCGTATTC 21161 >seq380 Length=884649 Score = 336 bits (372), Expect = 4e-90 Identities = 231/261 (89%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 21237 ATAAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 21178 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 || ||||||||||||| || || || |||||| || ||||||||||||||||||| Sbjct 21177 AGCGGGTGAACAATCCGACATTTTAAGACTTCTGCGTCTCAATGATAGGAAGAGCCGACA 21118 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 21117 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 21058 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| ||||||||||| || ||| || ||||||||||||||||| Sbjct 21057 GTGGTAACTTTTCTGTCACCTCTAGCCAGAACTTTTCTGGACTTAAAGGATCGATAGGCC 20998 Query 273 ACACTTTCATGGTTTGTATTC 293 | ||||| ||| |||||| Sbjct 20997 ATGCTTTCGCAGTTCGTATTC 20977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854388704832