Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq658 95.1 1e-17 seq657 95.1 1e-17 >seq658 Length=722326 Score = 95.1 bits (104), Expect = 1e-17 Identities = 130/178 (73%), Gaps = 4/178 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT--TTGCTCGAATACATTACC 67 || ||||||||||||||||||||| | ||||||||||| | | || |||||| | | Sbjct 206409 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCATTATCGCCTGAATACTGTTGC 206350 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 |||||||||| ||||||||| | |||||| || ||| ||| | | ||| ||||| Sbjct 206349 ATGGAATAATGGAATAGGACCT-TGGTTCTGTTCTGTTGGTCT-TCGGAATCGAGGTAAT 206292 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||| || | ||| | ||||| | |||| | | | |||||||||||||||| Sbjct 206291 GATTAAGAGGGACGGACGGGGACATTAGTACTGCGGCGATAGAGGTGAAATTCTTGGA 206234 >seq657 Length=2482312 Score = 95.1 bits (104), Expect = 1e-17 Identities = 130/178 (73%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT--TTGCTCGAATACATTACC 67 || ||||||||||||||||||||| | ||||||||||| | | || |||||| | | Sbjct 1123 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCATTATCGCCTGAATACTGTTGC 1182 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 |||||||||| ||||||||| | |||||| || ||| ||| | | ||| ||||| Sbjct 1183 ATGGAATAATGGAATAGGACCT-TGGTTCTGTTCTGTTGGTCT-TCGGAATCGAGGTAAT 1240 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||| || | ||| | ||||| | |||| | | | |||||||||||||||| Sbjct 1241 GATTAAGAGGGACGGACGGGGACATTAGTACTGCGGCGATAGAGGTGAAATTCTTGGA 1298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511993442880