Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq657 192 1e-46
seq471 154 3e-35
>seq657
Length=2482312
Score = 192 bits (212), Expect = 1e-46
Identities = 205/264 (78%), Gaps = 9/264 (3%)
Strand=Plus/Plus
Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127
||||||||||||||| | |||| | ||||| ||| || ||| |||||||||||||
Sbjct 1849 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 1905
Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185
||||||||||||||||| | ||||||||||||||||||||||| | | || || | |
Sbjct 1906 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 1965
Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244
|| |||| ||| |||| ||| || | || ||||| | ||||| | ||||| |
Sbjct 1966 TGTCTACCTACTCCGAAAGGAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 2025
Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304
| |||| |||||||| | | |||||||||| || ||||||| | ||||||||| | |
Sbjct 2026 GGATTGTAATTATTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 2085
Query 305 TTGATTACGTCCCTGCCCTTTGTA 328
||||||||||||||||||||||||
Sbjct 2086 TTGATTACGTCCCTGCCCTTTGTA 2109
>seq471
Length=29810
Score = 154 bits (170), Expect = 3e-35
Identities = 173/227 (76%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162
||||||| ||| |||||||||||| |||||||||||||||| |||||| ||||| ||||
Sbjct 23879 GGAAGTTCGAGCCAATAACAGGTCCGTGATGCCCTTAGATGACCTGGGCTGCACGTGCGC 23938
Query 163 TACACTGACA-GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTA 221
|||| ||| | |||| | ||| | || || | ||| | || ||||| |
Sbjct 23939 TACAATGATAAGAGCAGAA-AGTATACCAAATTCGAAAGAATGA---GGAAATCTAAGAA 23994
Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281
| || | ||||| | ||||| || |||||||||||||| || | |||||||||| |||||
Sbjct 23995 ATCT-TATCGTGATTGGGATTGATCATTGCAATTATTGATCATTAACGAGGAATTCCTAG 24053
Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||| || ||||| | | | | ||||| |||||||||||||||||
Sbjct 24054 TAAGTGCAAGTCATTATCTTGTGCTGATTGCGTCCCTGCCCTTTGTA 24100
Score = 100 bits (110), Expect = 5e-19
Identities = 82/100 (82%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288
||||| | ||||| || |||||||||||||| || | |||||||||| ||||||||| ||
Sbjct 28418 TCGTGATTGGGATTGATCATTGCAATTATTGATCATAAACGAGGAATTCCTAGTAAGTGC 28477
Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| | | | | ||||| |||||||||||||||||
Sbjct 28478 AAGTCATTATCTTGTGCTGATTGCGTCCCTGCCCTTTGTA 28517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947187478016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |