Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq657 192 1e-46 seq471 154 3e-35 >seq657 Length=2482312 Score = 192 bits (212), Expect = 1e-46 Identities = 205/264 (78%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 1849 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 1905 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 1906 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 1965 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| ||| |||| ||| || | || ||||| | ||||| | ||||| | Sbjct 1966 TGTCTACCTACTCCGAAAGGAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 2025 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||||||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 2026 GGATTGTAATTATTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 2085 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 2086 TTGATTACGTCCCTGCCCTTTGTA 2109 >seq471 Length=29810 Score = 154 bits (170), Expect = 3e-35 Identities = 173/227 (76%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 ||||||| ||| |||||||||||| |||||||||||||||| |||||| ||||| |||| Sbjct 23879 GGAAGTTCGAGCCAATAACAGGTCCGTGATGCCCTTAGATGACCTGGGCTGCACGTGCGC 23938 Query 163 TACACTGACA-GAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTA 221 |||| ||| | |||| | ||| | || || | ||| | || ||||| | Sbjct 23939 TACAATGATAAGAGCAGAA-AGTATACCAAATTCGAAAGAATGA---GGAAATCTAAGAA 23994 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 | || | ||||| | ||||| || |||||||||||||| || | |||||||||| ||||| Sbjct 23995 ATCT-TATCGTGATTGGGATTGATCATTGCAATTATTGATCATTAACGAGGAATTCCTAG 24053 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||| || ||||| | | | | ||||| ||||||||||||||||| Sbjct 24054 TAAGTGCAAGTCATTATCTTGTGCTGATTGCGTCCCTGCCCTTTGTA 24100 Score = 100 bits (110), Expect = 5e-19 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| | ||||| || |||||||||||||| || | |||||||||| ||||||||| || Sbjct 28418 TCGTGATTGGGATTGATCATTGCAATTATTGATCATAAACGAGGAATTCCTAGTAAGTGC 28477 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| | | | | ||||| ||||||||||||||||| Sbjct 28478 AAGTCATTATCTTGTGCTGATTGCGTCCCTGCCCTTTGTA 28517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947187478016