Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1255 104 4e-20
seq657 104 4e-20
seq191 104 4e-20
seq471 80.6 4e-13
>seq1255
Length=2071
Score = 104 bits (114), Expect = 4e-20
Identities = 94/116 (81%), Gaps = 2/116 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || ||| || | |||||| || | || |||| ||||
Sbjct 1768 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTGATCGACCGATCAGT 1825
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116
| | ||||||||||||| | ||||||||| ||||||||||||||||||||||||||
Sbjct 1826 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 1881
>seq657
Length=2482312
Score = 104 bits (114), Expect = 4e-20
Identities = 94/116 (81%), Gaps = 2/116 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || ||| || | |||||| || | || |||| ||||
Sbjct 7874 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTGATCGACCGATCAGT 7931
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116
| | ||||||||||||| | ||||||||| ||||||||||||||||||||||||||
Sbjct 7932 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 7987
>seq191
Length=200012
Score = 104 bits (114), Expect = 4e-20
Identities = 94/116 (81%), Gaps = 2/116 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || ||| || | |||||| || | || |||| ||||
Sbjct 84139 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTGATCGACCGATCAGT 84082
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116
| | ||||||||||||| | ||||||||| ||||||||||||||||||||||||||
Sbjct 84081 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 84026
>seq471
Length=29810
Score = 80.6 bits (88), Expect = 4e-13
Identities = 71/85 (84%), Gaps = 4/85 (5%)
Strand=Plus/Plus
Query 40 GCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTAC-CATCTGCTGGATTATGGCTGAACGC 98
|||| || ||| | || |||||| || ||||||| ||| | ||||| ||||||||||||
Sbjct 21487 GCGGTTGGCTGGCAAGCCAGTGCTGCAAAGCTACGCATGT--TGGATAATGGCTGAACGC 21544
Query 99 CTCTAAGTCAGAATCCATGCCAGAA 123
||||||||||||||||| ||| |||
Sbjct 21545 CTCTAAGTCAGAATCCA-GCCTGAA 21568
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819189508608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |