Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1255 104 4e-20 seq657 104 4e-20 seq191 104 4e-20 seq471 80.6 4e-13 >seq1255 Length=2071 Score = 104 bits (114), Expect = 4e-20 Identities = 94/116 (81%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | || |||| |||| Sbjct 1768 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTGATCGACCGATCAGT 1825 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 1826 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 1881 >seq657 Length=2482312 Score = 104 bits (114), Expect = 4e-20 Identities = 94/116 (81%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | || |||| |||| Sbjct 7874 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTGATCGACCGATCAGT 7931 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 7932 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 7987 >seq191 Length=200012 Score = 104 bits (114), Expect = 4e-20 Identities = 94/116 (81%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | || |||| |||| Sbjct 84139 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTGATCGACCGATCAGT 84082 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 84081 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 84026 >seq471 Length=29810 Score = 80.6 bits (88), Expect = 4e-13 Identities = 71/85 (84%), Gaps = 4/85 (5%) Strand=Plus/Plus Query 40 GCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTAC-CATCTGCTGGATTATGGCTGAACGC 98 |||| || ||| | || |||||| || ||||||| ||| | ||||| |||||||||||| Sbjct 21487 GCGGTTGGCTGGCAAGCCAGTGCTGCAAAGCTACGCATGT--TGGATAATGGCTGAACGC 21544 Query 99 CTCTAAGTCAGAATCCATGCCAGAA 123 ||||||||||||||||| ||| ||| Sbjct 21545 CTCTAAGTCAGAATCCA-GCCTGAA 21568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819189508608