Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq658 430 4e-118 seq657 430 4e-118 seq471 367 4e-99 >seq658 Length=722326 Score = 430 bits (476), Expect = 4e-118 Identities = 411/519 (79%), Gaps = 24/519 (5%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAG---AGCCCTGTATCAGTATTTATTGTCACT 56 ||||||||||||||||| ||| | || ||| ||||| |||| ||||| | |||||| Sbjct 206632 GTACTCATTCCAATTACGAGAACGCATAAGCGAAGCCC-GTATTGTTATTTTTCGTCACT 206690 Query 57 ACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 116 |||||| ||| | || |||||||||||||||||||||||||||||||||||||||||| Sbjct 206691 ACCTCCTCGTTCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 206750 Query 117 CGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCAT 176 ||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 206751 CGTCTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCAT 206810 Query 177 GGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236 ||||||| || |||||||||||||||||||| |||||| | | ||| || |||| Sbjct 206811 GGTAGGCATATAACCTACCATCGAAAGTTGATAAGGCAGACACTCGAAGGATATGCCGCC 206870 Query 237 GGCTCAAGGCCATGCGATTCG-TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCG 295 ||| | |||||||||| | | | |||||| || |||||| ||| | || | Sbjct 206871 GGCACGAGGCCATGCGGTCAGCTGCAGTTATCCAGAGTCACCA-------CCGTAAGGTG 206923 Query 296 TTG--------GTTTTTTATCTAATAAATACACCCCTTC-CGAAG-TCGGGGTTTTTAGC 345 ||| | | || |||||||||| | | || | ||| | | | |||| || Sbjct 206924 TTGCCACCTTTGGTCTTGGTCTAATAAATGCGCTCCACCACGAGGATGAAGCTTTTCGGC 206983 Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGA 405 |||||||||||||||||||||||| |||||||||||| | | | ||| ||| || | Sbjct 206984 ATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATCA 207043 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465 |||||||||||||||||||||||| ||||||| || | | | | ||||||||||||| Sbjct 207044 TAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA-ATACGGTATGTACTTAGACATGC 207102 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| Sbjct 207103 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 207141 >seq657 Length=2482312 Score = 430 bits (476), Expect = 4e-118 Identities = 411/519 (79%), Gaps = 24/519 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAG---AGCCCTGTATCAGTATTTATTGTCACT 56 ||||||||||||||||| ||| | || ||| ||||| |||| ||||| | |||||| Sbjct 743 GTACTCATTCCAATTACGAGAACGCATAAGCGAAGCCC-GTATTGTTATTTTTCGTCACT 685 Query 57 ACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 116 |||||| ||| | || |||||||||||||||||||||||||||||||||||||||||| Sbjct 684 ACCTCCTCGTTCTGAGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 625 Query 117 CGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCAT 176 ||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 624 CGTCTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCAT 565 Query 177 GGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236 ||||||| || |||||||||||||||||||| |||||| | | ||| || |||| Sbjct 564 GGTAGGCATATAACCTACCATCGAAAGTTGATAAGGCAGACACTCGAAGGATATGCCGCC 505 Query 237 GGCTCAAGGCCATGCGATTCG-TTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCG 295 ||| | |||||||||| | | | |||||| || |||||| ||| | || | Sbjct 504 GGCACGAGGCCATGCGGTCAGCTGCAGTTATCCAGAGTCACCA-------CCGTAAGGTG 452 Query 296 TTG--------GTTTTTTATCTAATAAATACACCCCTTC-CGAAG-TCGGGGTTTTTAGC 345 ||| | | || |||||||||| | | || | ||| | | | |||| || Sbjct 451 TTGCCACCTTTGGTCTTGGTCTAATAAATGCGCTCCACCACGAGGATGAAGCTTTTCGGC 392 Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGA 405 |||||||||||||||||||||||| |||||||||||| | | | ||| ||| || | Sbjct 391 ATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAATTGGTCAACATCCAATGAATCA 332 Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGC 465 |||||||||||||||||||||||| ||||||| || | | | | ||||||||||||| Sbjct 331 TAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA-ATACGGTATGTACTTAGACATGC 273 Query 466 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||| Sbjct 272 ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 234 >seq471 Length=29810 Score = 367 bits (406), Expect = 4e-99 Identities = 360/463 (78%), Gaps = 35/463 (8%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 22978 TATTTCTTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCACCC 22919 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22918 TTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 22859 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 ||||| || || ||||||||| || |||||| | |||| ||||||| |||||| ||| Sbjct 22858 CCCGTCAATGCCTCGGTAGGCCAATACCCTACCGACCAAAGCTGATAGGTCAGAAACTTG 22799 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGG 281 || | | | ||||| ||| ||| || | | ||| || ||||||| | Sbjct 22798 AACG------GTCTGTCTCAA----ATGAGATCCGCAATTTCATTGTG-ATCACCAGTGA 22750 Query 282 AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTT 341 || | || || | ||| ||| | ||| | |||| || Sbjct 22749 AGGTTCAAAAGG--------------CCAATGAATGCTACCC-------GATAGGGTATT 22711 Query 342 TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAA 401 | |||||||||||||| |||||||||| |||||||||| |||||| | | | | ||| Sbjct 22710 TCGCATGTATTAGCTCCAGAATTACCATGGTTATCCATTTAGTAACG-ATCACCGTGTAA 22652 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 | ||||||| | |||||||| |||||||||||| ||||||| | |||||||||||||| Sbjct 22651 ATTATAACTGTTATAATGAGCTATTCGCAGTTTCGCTGTATA-AAAGCTTATACTTAGAC 22593 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||| |||||||||| ||||||||||| Sbjct 22592 TTGCATGGCTTAATCTTTGAAACAAGCATATAACTACTGGCAG 22550 Score = 174 bits (192), Expect = 5e-41 Identities = 145/175 (83%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 330 AGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT 389 |||||| |||| |||||||||||| |||||||||| || ||||||| || ||| || Sbjct 28410 AGTCGGAACTTTTCGCATGTATTAGCCACAGAATTACCATGGATATCCATTTAATAATGT 28351 Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449 | | |||| ||||||| |||||||||| |||||||||||| ||||||| | || Sbjct 28350 C--ACCGTGTAAATTATAACTGTTTTAATGAGCTATTCGCAGTTTCGCTGTATAAAA-GC 28294 Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||| ||||||||||||||||| | |||||||||||||||||||||| Sbjct 28293 TTATACTTAGACTTGCATGGCTTAATCTTTAAAACAAGCATATGACTACTGGCAG 28239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510380032512