Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq543 80.6 8e-11 >seq543 Length=15403 Score = 80.6 bits (88), Expect = 8e-11 Identities = 104/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACT 2832 |||||||| ||||||||||||||||||||| || || || ||| | | |||| | Sbjct 9178 GTATCACATCGTTCAGGTGAAACTGAAGATACATTTATTGCCGATCTGGTTGTTG-GTTT 9236 Query 2833 AAC-GCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAA 2891 | | |||||||||| || || ||| || | ||| | || ||| | |||||||| || Sbjct 9237 ATCAACTGGTCAAATAAAAACTGGTGCACCATGTCGTTCCGAACGTTTAGCTAAATATAA 9296 Query 2892 CCAATTGCTTCGTATCGAAGA 2912 ||| | |||||||| ||||| Sbjct 9297 TCAAATTCTTCGTATTGAAGA 9317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156035950392168