Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq434 194 3e-47 seq1322 86.0 9e-15 >seq434 Length=366605 Score = 194 bits (214), Expect = 3e-47 Identities = 176/217 (81%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| | Sbjct 109726 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 109669 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGAT-T 119 |||||| | | || |||||||| | ||||| | ||||| | | |||| | | Sbjct 109668 CTCGTTCATGGGGAATAATTGCAAACCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGAT 109609 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| | ||||| || |||| || ||| | | |||||||| ||||| |||| Sbjct 109608 ACCCGGGCCTTTTGGCCACGGA---AGACACGCTGATTCCTTCAGTGTATCGCGCATGCG 109552 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216 ||||||||||||||||||||||||||||||||||||| Sbjct 109551 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 109515 Score = 185 bits (204), Expect = 1e-44 Identities = 180/226 (80%), Gaps = 7/226 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| ||| |||| |||||||| |||||||||||||||| |||||| | Sbjct 297778 GTACAAAGGGCAGGGATGTAATCAATGCGAGCTT-ATGACTCGCGCTTACTGGGAATT-C 297721 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || |||||||| | ||||| | ||||| | | |||| | || Sbjct 297720 CTCGTTCATGGGGAATAATTGCAAGCCCCAATCCCTAGCACGAAGGAGGTTCAGCGGGTT 297661 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 || || ||| ||||||| || ||| || ||| | | ||||||||||||||||||| Sbjct 297660 ACTTGGGCCTTTCGGCCAGGGA---AGATACGCTGATTCCTTCAGTGTAGCGCGCGTGCG 297604 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 ||| ||||||||||||||||||||||| ||||||||| ||||| || Sbjct 297603 GCCTAGAACATCTAAGGGCATCACAGAGCTGTTATTG-CTCAATCT 297559 >seq1322 Length=25083 Score = 86.0 bits (94), Expect = 9e-15 Identities = 82/100 (82%), Gaps = 5/100 (5%) Strand=Plus/Minus Query 167 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 ||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||| || Sbjct 10399 TAGCGCGCGTGCGGCCCAGAACAGCTAAGGGTATCACAGACCTGTTATTG-CTCAATCT- 10342 Query 227 CCGTG-GCCTAAAAGGC-CATCTCCCTCGAATAGCACAGT 264 |||| | || ||| | | | |||||| || || | ||| Sbjct 10341 -CGTGCGGATAGAAGCCGCCTGTCCCTCTAAGAGGATAGT 10303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751971093120