Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq434 196 9e-48 >seq434 Length=366605 Score = 196 bits (216), Expect = 9e-48 Identities = 219/286 (77%), Gaps = 10/286 (3%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||||| || |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 108742 TGCTCTTCATTGAGTGTCGAGGTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 108801 Query 100 AAAGCAGGCCTTT---GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| || || |||||| | |||||||||||| ||||||||| | |||| Sbjct 108802 AAAGCAGGCTATTTTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT-CGGT 108860 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| | Sbjct 108861 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 108919 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| ||| ||||||| Sbjct 108920 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACAGAAGCGAAAG 108979 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || |||| |||||||||||||||| ||||||||||||| || Sbjct 108980 CATTTGCCAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 109024 Score = 187 bits (206), Expect = 5e-45 Identities = 217/286 (76%), Gaps = 10/286 (3%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||||| || |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 296809 TGCTCTTCATTGAGTGTCGAGGTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 296868 Query 100 AAAGCAGGCCTTT---GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| || || |||||| | |||||||||||| ||||||||| | |||| Sbjct 296869 AAAGCAGGCTATTTTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT-CGGT 296927 Query 156 TCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGGGGTGT 212 |||||||||||||||| | ||| | ||| |||||||||||||||| || ||||| | Sbjct 296928 TCTATTTTGTTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGGCAT 296986 Query 213 CAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAG 272 ||||| || ||||||||||||||||||| ||||| || ||||||| Sbjct 296987 TCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGTACAGAAGCGAAAG 297046 Query 273 CGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 | || | || |||||||||||||||| ||||||||||||| || Sbjct 297047 CATTTGCTAAAAATGTTTTCATTAATCA-AGAACGAAAGTTAGAGG 297091 Score = 111 bits (122), Expect = 3e-22 Identities = 108/136 (79%), Gaps = 5/136 (4%) Strand=Plus/Plus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||||| || |||| || | ||| | || ||||||||||| ||||||||||| | Sbjct 108294 TGCTCTTCATTGAGTGTCGAGGTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 108353 Query 100 AAAGCAGGC---CTTTGCTCGAATAC-ATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| || || |||||| | |||||||||||| ||||||||| | |||| Sbjct 108354 AAAGCAGGCTATTTTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT-CGGT 108412 Query 156 TCTATTTTGTTGGTTT 171 |||||||||||||||| Sbjct 108413 TCTATTTTGTTGGTTT 108428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915163684864