Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq434 140 1e-30
seq445 136 2e-29
>seq434
Length=366605
Score = 140 bits (154), Expect = 1e-30
Identities = 119/144 (83%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| || ||||||||||| |||| |||||| | | ||||| |||||||
Sbjct 273154 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 273095
Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158
|| | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| |
Sbjct 273094 AT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 273036
Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || ||||||||
Sbjct 273035 GAGAGAGTTCAAGAGTACGTGAAA 273012
Score = 136 bits (150), Expect = 2e-29
Identities = 108/130 (83%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
||||| || |||| |||||||||||||||||||||||||||| ||| |||| |||
Sbjct 112225 AGAGCGTACATGTTCGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 112284
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
|||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||
Sbjct 112285 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 112344
Query 674 ATAGGGGCGA 683
||||||||||
Sbjct 112345 ATAGGGGCGA 112354
Score = 136 bits (150), Expect = 2e-29
Identities = 108/130 (83%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
||||| || |||||||||||||||||||||||||||||||| ||| |||| |||
Sbjct 272372 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 272313
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
|||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||
Sbjct 272312 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 272253
Query 674 ATAGGGGCGA 683
||||||||||
Sbjct 272252 ATAGGGGCGA 272243
Score = 123 bits (136), Expect = 1e-25
Identities = 117/146 (80%), Gaps = 4/146 (3%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGG--TAAATTTCTTCTAAAGCTAA 97
|||||| |||| ||| || ||||||||||| |||| || |||| | | ||||| |||||
Sbjct 111283 GAGTCGGGTTGCTTGAGAGTGCAGCTCTAAGTGGGTGGGGTAAACTCCATCTAAGGCTAA 111342
Query 98 ATATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156
|||| | ||| ||||||||||||| ||||||| || | ||||| ||||||| ||||||
Sbjct 111343 ATAT-GACCACGAGACCGATAGCGAACAAGTACCGTCAGGGAAAGTTGAAAAGAACTTTG 111401
Query 157 GAAAGAGAGTTAAAAAGCACGTGAAA 182
| |||||||| || | ||||||||
Sbjct 111402 AAGAGAGAGTTCAAGACTACGTGAAA 111427
>seq445
Length=212023
Score = 136 bits (150), Expect = 2e-29
Identities = 108/130 (83%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
||||| || |||||||||||||||||||||||||||||||| ||| |||| |||
Sbjct 141409 AGAGCGTACACGTTGGGACCCGAAAGATGGTGAACTATGCCTGGTCAGGACGAAGTCAGG 141468
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
|||||| ||| |||||| || |||| ||||| ||||||||||||||||| | |||||
Sbjct 141469 GGAAACCCTGATGGAGGTCCGTAGCGATTCTGACGTGCAAATCGATCGTCGGAACTGGGT 141528
Query 674 ATAGGGGCGA 683
||||||||||
Sbjct 141529 ATAGGGGCGA 141538
Score = 127 bits (140), Expect = 9e-27
Identities = 116/144 (81%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||| || ||||| ||||| |||| ||||| | | ||||| |||||||
Sbjct 140676 GAGTCGGGTTGCTTGAGAGTGCAGGTCTAAGTGGGTGGTAATCTCCATCTAAGGCTAAAT 140735
Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158
|| | ||| ||||||||||||| ||||||| |||| ||||| |||||| |||||| |
Sbjct 140736 AT-GACCACGAGACCGATAGCGAACAAGTATCGTGAGGGAAAGTAGAAAAGAACTTTGAA 140794
Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || ||||||||
Sbjct 140795 GAGAGAGTTCAACAGTACGTGAAA 140818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079914886400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |