Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq445 80.6 1e-13 seq434 80.6 1e-13 >seq445 Length=212023 Score = 80.6 bits (88), Expect = 1e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| | |||||||| Sbjct 140454 GGAAAAGAAACTAACTAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAGAAGCCCAGCA 140513 Query 61 CCGAATCCC 69 | ||||||| Sbjct 140514 CTGAATCCC 140522 >seq434 Length=366605 Score = 80.6 bits (88), Expect = 1e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| ||| |||| ||||||| ||||||| | |||||||| Sbjct 273376 GGAAAAGAAACTAACTAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAGAAGCCCAGCA 273317 Query 61 CCGAATCCC 69 | ||||||| Sbjct 273316 CTGAATCCC 273308 Score = 75.2 bits (82), Expect = 5e-12 Identities = 58/69 (84%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||| |||||| ||| |||| ||||||| ||||||| || |||| ||| Sbjct 111061 GGAAAAGAAACTAAATAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAAATAGCCTAGCA 111120 Query 61 CCGAATCCC 69 | ||||||| Sbjct 111121 CTGAATCCC 111129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230391429120