Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq434 205 1e-50
seq1322 170 3e-40
>seq434
Length=366605
Score = 205 bits (226), Expect = 1e-50
Identities = 216/292 (74%), Gaps = 47/292 (16%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 297626 TCCTTCAGTGTAGCGCGCGTGCGGCCTAGAACATCTAAGGGCATCACAGAGCTGTTATTG 297567
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC-------------- 117
| |||| || | |||| |||||| ||||||||||||||
Sbjct 297566 C-TCAATCT-CGTGCGGCTTGAAGCCGCCTGTCCCTCTAAGAAGATTCGTTTGTACGTCG 297509
Query 118 --------AGCCAC-CAACCATAGTCGATGG----------------------GGCTATT 146
| || | | ||| | |||| || | |||||
Sbjct 297508 GTAGTAAAAACCGCTCGACCGAAATCGAGGGCCTTCAAGATACCAGAAAGTACGCCTATT 297449
Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206
||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 297448 TAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAA 297389
Query 207 GAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 297388 GAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 297337
Score = 185 bits (204), Expect = 1e-44
Identities = 111/117 (95%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 109386 CTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 109327
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 109326 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTATCAATCTGTC 109270
Score = 98.7 bits (108), Expect = 2e-18
Identities = 85/103 (83%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 109574 TCCTTCAGTGTATCGCGCATGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 109515
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA 114
|||| | || |||| |||| | |||| ||||||||
Sbjct 109514 -TTCAATC-TCGTGCGGCTAGAAGTCGCCTGTCCTTCTAAGAA 109474
>seq1322
Length=25083
Score = 170 bits (188), Expect = 3e-40
Identities = 196/266 (74%), Gaps = 31/266 (12%)
Strand=Plus/Minus
Query 22 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 81
||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||| ||
Sbjct 10399 TAGCGCGCGTGCGGCCCAGAACAGCTAAGGGTATCACAGACCTGTTATTGC-TCAATCT- 10342
Query 82 CCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG------CCAC-CAACCATAGTC 134
| || | |||||| |||||||||||| | || || | | |||| | ||
Sbjct 10341 CGTGCGGATAGAAGCCGCCTGTCCCTCTAAGAGGATAGTAAAAACCGCTCGACCAAAATC 10282
Query 135 GATG----------------------GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTAT 172
|| | || ||| |||||||| || |||||| ||||||
Sbjct 10281 GAGGACCTTCAAGATACCAGAAAGTAGGTCTACTTAGCAGGCTAGAGTCTCGATCGTTAG 10222
Query 173 CGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAG 232
| |||||||||||||||||| |||| | |||||||||| || | | ||||||||| | |
Sbjct 10221 CAGAATTAACCAGACAAATCGCTCCGCAAACTAAGAACAGCTAAGTACCACCACCTACCG 10162
Query 233 AATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||||
Sbjct 10161 AATCAAGAAAGAGCTATCAATCTGTC 10136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796769371008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |