Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= AAMG01001188.1 Length=621 Score E Sequences producing significant alignments: (Bits) Value seq3086 389 1e-105 >seq3086 Length=9139 Score = 389 bits (430), Expect = 1e-105 Identities = 427/564 (76%), Gaps = 3/564 (1%) Strand=Plus/Plus Query 40 TTTCGAGGCGTTCGCCGAGAAACGGCTTGACGAAGGATTTGCAGCTCGGTGATCTGCGCC 99 |||||||||||| || || ||||| ||||| |||| |||| || | || ||||| Sbjct 4306 TTTCGAGGCGTTGGCGCTAAAGCGGCTA-ACGAAAGATT-GCAGTTCAGCAATTTGCGCT 4363 Query 100 TTCTTTCTTGGCGTTGTCCGACAGCAGTTGCTCGCGGGACTGGGTCGCCACGGTCATGTA 159 || ||||||||| ||||| |||| ||| | ||||| | ||| || || | | |||||| Sbjct 4364 TT-TTTCTTGGCATTGTCTGACAACAGACGTTCGCGCGCCTGCGTGGCTGCCGCCATGTA 4422 Query 160 CTCGTCGTAGTTGCCCGGGAACAGGCGCAGCTCGCCGTAGTCCAGGTCAGCCATGTGGGT 219 ||||| ||||| || || | | |||||| || ||||| ||||| || ||||| ||||| Sbjct 4423 TTCGTCATAGTTTCCGGGATAAACGCGCAGTTCACCGTAATCCAGATCCGCCATATGGGT 4482 Query 220 ACACACGCTGTTCAGGAAGTGACGGTCGTGAGAGATGATGATCATCAGGCTGGAACGCTG 279 |||||| | ||||||||||| || ||||| || ||||||||||| ||| ||| | Sbjct 4483 ACACACCATATTCAGGAAGTGGCGATCGTGGGAAATGATGATCATGGTACTGTTACGTTC 4542 Query 280 GGTCAGGATATTTTCCAGCCAGCGGATGGTGTTGATGTCCAAGTGGTTGGTCGGTTCGTC 339 | |||| | |||||||||||| ||||| |||| ||| |||| || |||||||||||| || Sbjct 4543 GTTCAGCACATTTTCCAGCCAACGGATCGTGTCGATATCCAGGTTGTTGGTCGGTTCATC 4602 Query 340 GAGCAACAGCACTTCAGGATCGGAAAACAGCGCCTGGGCCAGCAATACACGCAGCTTCCA 399 |||| || | ||||||| |||||||| |||||| |||| || || ||||| ||||| Sbjct 4603 AAGCAGCAAAATATCAGGATTGGAAAACAACGCCTGCGCCAACAGAACGCGCAGTTTCCA 4662 Query 400 GCCCGGGGACACTTCGCTCATCGGACCGAAGTGCTGCTCCAGCGGAATACCCAGACCCAG 459 ||| || | ||||| |||||| ||||| | ||||| |||||||| ||||||| || | Sbjct 4663 GCCGGGAGCGACTTCACTCATCAGACCGTAATGCTGTTCCAGCGGGATACCCACGCCTAA 4722 Query 460 CAGCAGCTCACCGGCACGGGATTCGGCGGTGTAGCCGTCCATCTCGGCGAACTCGGTTTC 519 |||||| || || || |||||||| || | || |||||||| ||| || | | | ||| Sbjct 4723 CAGCAGTTCTCCTGCGCGGGATTCTGCACTATAACCGTCCATTTCGCCGTATTTGACTTC 4782 Query 520 CAGCTCGGCCACGGCCATGCCGTCTTCTTCGCTCATTTCCGGCAGCGAGTAAATACCATC 579 ||| ||||| || ||| ||||| ||||||||||| |||| || |||||| | || Sbjct 4783 CAGATCGGCGACTTTATAGCCATCTTCCTCGCTCATTTCTGGCAACGCGTAAATGCGGTC 4842 Query 580 ACGCTCGGCCTTGACCTTCCACAG 603 |||||| | || || |||| || Sbjct 4843 ACGCTCCTCTTTTACGGTCCAGAG 4866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1881523004928