Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq434 91.5 9e-17
seq26 87.8 1e-15
seq1322 73.4 2e-11
>seq434
Length=366605
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||| |||| || ||||||||| ||||||||||| ||||||||||
Sbjct 109775 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 109719
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||| ||||
Sbjct 109718 GGCAGGGACGTAAT-CAACGCGAGCT 109694
Score = 82.4 bits (90), Expect = 5e-14
Identities = 73/86 (85%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||| |||| || ||||||||| ||||||||||| ||||||||||
Sbjct 297827 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 297771
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||| ||||| ||| || ||||
Sbjct 297770 GGCAGGGATGTAAT-CAATGCGAGCT 297746
>seq26
Length=2876367
Score = 87.8 bits (96), Expect = 1e-15
Identities = 74/86 (86%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||| |||| || ||||||||| ||||||||||| |||||| |||
Sbjct 1786154 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACGAAG 1786210
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||| ||||
Sbjct 1786211 GGCAGGGACGTAAT-CAACGCGAGCT 1786235
>seq1322
Length=25083
Score = 73.4 bits (80), Expect = 2e-11
Identities = 48/52 (92%), Gaps = 1/52 (2%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATA 113
|||| ||||||||| ||||| ||||| |||||||||||||||||||||||||
Sbjct 10448 TTCAATCGGTAGTA-GCGACAGGCGGTGTGTACAAAGGGCAGGGACGTAATA 10398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300788810240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |