Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq3498 132 1e-28 >seq3498 Length=42657 Score = 132 bits (146), Expect = 1e-28 Identities = 278/402 (69%), Gaps = 17/402 (4%) Strand=Plus/Minus Query 3 ATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTTGA 62 ||||||||||| || ||||| || | ||||| |||| ||||||||||| || || | Sbjct 34563 ATGGTCAGCAAATCACCGCCAACTTCCGTCCAGGCCAACCCAGTGACCTGCCCAACGCGG 34504 Query 63 TCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGC-GCACGCCGAGGAAGTGCTCCAGGGA 121 | | | || || |||||||| | || || | ||||| ||||| | | ||| Sbjct 34503 TTTTCTTCATCCGCGCGGCCGTAG-TCAAAGCGCTGAACGCCAAGGAAATATTTAAGGTT 34445 Query 122 GTCGGCCGTGACCTTCACCGAG---AAGCGTTTT-TCCAGC-GCAT-GTTCCTTGACCGC 175 ||| |||| | || || | || ||||| |||| | ||| ||| || ||||| Sbjct 34444 ATCGCCCGTAATCT-CAATATGCTTAACGGTTTTATCCATCAGCAGCGTT--TTTACCGC 34388 Query 176 CTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTA 235 || ||||| | || | ||| | |||||||| | ||||| || ||||| || ||||| Sbjct 34387 TTTACGGCACAATTTGGAGATTTCACGCTCCAGACTGCGCACGCCAGCTTCACGCGTGTA 34328 Query 236 GTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCC 295 ||| |||| ||| || ||| | | | | |||| | ||| || |||||||| | Sbjct 34327 GTAACGGATGATCCCGGAGATAGCACTGTCATCAACGGTCAACTCACCTTTCTTCAGTGC 34268 Query 296 ATTGGCCGAAATCTGCTTGGGC-GCGA--GGTACTTGATGGCGATGTTGATCTTCTCGTC 352 ||| ||||||||| ||| || | || |||| || || |||| |||||| || Sbjct 34267 GTTGCGTTCAATCTGCTTCGGCAGCAAATGGCGCTTG---GCAATATTGAGCTTCTCATC 34211 Query 353 TTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 |||||||| || | |||||||||||||||||| |||||||| Sbjct 34210 CTCGGTGTAGCCAGACAGGCGAATCACTTCCATACGGTCCAG 34169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158354034688