Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq434 116 4e-24 >seq434 Length=366605 Score = 116 bits (128), Expect = 4e-24 Identities = 139/183 (76%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATAC-ATTA 65 || ||||||||||| ||||||||| | | ||||||||| || || |||||| | Sbjct 108773 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATTTTCGCCTGAATACTGTGT 108832 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC--CG 123 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || | Sbjct 108833 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGAGG 108890 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| |||| ||| || ||||| | ||||| || | |||||||||||||| Sbjct 108891 TAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 108950 Query 184 GAT 186 ||| Sbjct 108951 GAT 108953 Score = 116 bits (128), Expect = 4e-24 Identities = 139/183 (76%), Gaps = 8/183 (4%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATAC-ATTA 65 || ||||||||||| ||||||||| | | ||||||||| || || |||||| | Sbjct 296840 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATTTTCGCCTGAATACTGTGT 296899 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC--CG 123 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || | Sbjct 296900 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGAGG 296957 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| |||| ||| || ||||| | ||||| || | |||||||||||||| Sbjct 296958 TAATGATTAATAGGGACAGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTG 297017 Query 184 GAT 186 ||| Sbjct 297018 GAT 297020 Score = 86.0 bits (94), Expect = 6e-15 Identities = 84/105 (80%), Gaps = 5/105 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATAC-ATTA 65 || ||||||||||| ||||||||| | | ||||||||| || || |||||| | Sbjct 108325 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCTATTTTCGCCTGAATACTGTGT 108384 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||||| ||||||||| | |||||||||||||| ||||| Sbjct 108385 GCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT 108428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511980318720