Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq434 210 4e-52
seq1322 93.3 8e-17
seq219 84.2 4e-14
>seq434
Length=366605
Score = 210 bits (232), Expect = 4e-52
Identities = 205/258 (79%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| ||||| ||||||| || | ||||| ||||||||| ||||||
Sbjct 297525 CTTCTTAGAGGGACAGGCGGCTTCAAGCCGCACGA-GATTGAG-CAATAACAGCTCTGTG 297582
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||||||||||||| |||||||||||||||||||||| || || || | | ||
Sbjct 297583 ATGCCCTTAGATGTTCTAGGCCGCACGCGCGCTACACTGAAGGAATCAGCGTAT-CTTCC 297641
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
| |||||| |||| | |||| | | || ||| ||||||| ||||| | | |||
Sbjct 297642 C--TGGCCGAAAGGCCCAAGTAACCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGCTTG 297699
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | |||||||||| || |||||||||| ||||| ||| ||| ||||||
Sbjct 297700 CAATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCATTGATT 297759
Query 311 ACGTCCCTGCCCTTTGTA 328
|| |||||||||||||||
Sbjct 297760 ACATCCCTGCCCTTTGTA 297777
Score = 203 bits (224), Expect = 6e-50
Identities = 203/257 (79%), Gaps = 6/257 (2%)
Strand=Plus/Plus
Query 73 TTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
|||||||| |||| || || | ||||| || | |||| |||||||||||||||||
Sbjct 109474 TTCTTAGAAGGACAGGCGACTTCTAGCCGCACGA-GATTGAA-CAATAACAGGTCTGTGA 109531
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||||||||||||||||||||||| ||||| |||||||| || || || || | ||
Sbjct 109532 TGCCCTTAGATGTTCTGGGCCGCATGCGCGATACACTGAAGGAATCAGCGTGT-CTTC-- 109588
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
| ||||| |||| | ||||| | | || ||| ||||||| ||||| | | ||||
Sbjct 109589 CGTGGCCAAAAGGCCCGGGTATCCCGCTGAACCTCCTTCGTGCTAGGGATTGGGGTTTGC 109648
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
||||||| | | | |||||||||| || |||||||||| ||||| ||| |||||||||||
Sbjct 109649 AATTATTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATTA 109708
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||||||||||
Sbjct 109709 CGTCCCTGCCCTTTGTA 109725
>seq1322
Length=25083
Score = 93.3 bits (102), Expect = 8e-17
Identities = 78/92 (85%), Gaps = 3/92 (3%)
Strand=Plus/Plus
Query 74 TCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132
|||||||||||| ||||| | | ||| || | ||||| ||||||||||||||||||
Sbjct 10310 TCTTAGAGGGACAGGCGGCTTCTATCCGCACGA-GATTGAG-CAATAACAGGTCTGTGAT 10367
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164
||||||| |||||||||||||||||||||||
Sbjct 10368 ACCCTTAGCTGTTCTGGGCCGCACGCGCGCTA 10399
>seq219
Length=398176
Score = 84.2 bits (92), Expect = 4e-14
Identities = 155/222 (70%), Gaps = 9/222 (4%)
Strand=Plus/Minus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
|| |||||||||||| |||| || || | || ||||| ||||| |||||| ||||| |
Sbjct 206952 GCGATAACAGGTCTGCGATGTTCTCAGCTATTTTGGGCTGCACGTGCGCTAAACTGATGG 206893
Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCT---GGGTAATCTTGTTAAACT--CTG 228
| || ||| || || | |||| | || | ||| | | | || | |||
Sbjct 206892 AAGGAATCAGTCTGTCTACTGCGGTGGAAAGGCTCCAGTATAACCGTTTGAATCCTCCTG 206833
Query 229 TCGTGCTGGGGA--TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGC 286
|| || |||| | |||| |||||||| | | | ||||||| || || |||||||
Sbjct 206832 GCG-GCAAGGGACTTGGAGCGCA-CAATTATTCCACATAAACGAGGGATTCCCAGTAAGC 206775
Query 287 GCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||| |||| ||| |||||||||||| | ||||||||||||
Sbjct 206774 GCGACTCATAAGCTCGCGTTGATTACATATCTGCCCTTTGTA 206733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947162415104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |