Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq434 307 3e-81 seq2741 170 6e-40 seq445 158 4e-36 seq3334 136 1e-29 seq2696 84.2 7e-14 >seq434 Length=366605 Score = 307 bits (340), Expect = 3e-81 Identities = 173/175 (99%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 114584 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 114525 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 114524 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTT 114465 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 114464 GAATTTCTTCACGTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 114410 Score = 159 bits (176), Expect = 1e-36 Identities = 96/101 (95%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| | Sbjct 270517 CCTTAAGAGAGTCATAGTTACTCCCGCCATTTACCCACGCTTGCTTGAATTTCTTCACGT 270576 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||| ||||||| Sbjct 270577 TGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 270617 Score = 156 bits (172), Expect = 1e-35 Identities = 94/99 (95%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||| ||||||||||| || ||||||| ||| ||| Sbjct 114728 TTAAGAGAGTCATAGTTACTCCCGCCGTTCACCCGCGCTTGCTTCAATTTCTACACGTTG 114669 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| Sbjct 114668 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 114630 Score = 132 bits (146), Expect = 2e-28 Identities = 76/78 (97%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 268636 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCACGTCACTAATTAGATGAC 268695 Query 419 GAGGCATTTGGCTACCTT 436 || ||||||||||||||| Sbjct 268696 GAAGCATTTGGCTACCTT 268713 Score = 84.2 bits (92), Expect = 7e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 384 GTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 116707 GTTAATCCATTCATGCGCTTCACTAATTAGATGACGAGGCATTTGGCTA 116659 >seq2741 Length=15530 Score = 170 bits (188), Expect = 6e-40 Identities = 97/99 (98%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 7027 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTCTTCACGTTG 7086 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| Sbjct 7087 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 7125 Score = 156 bits (172), Expect = 1e-35 Identities = 88/89 (99%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9463 TTTCGCTAGAAAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 9522 Query 408 AATTAGATGACGAGGCATTTGGCTACCTT 436 ||||||||||||||||||||||||||||| Sbjct 9523 AATTAGATGACGAGGCATTTGGCTACCTT 9551 Score = 122 bits (134), Expect = 3e-25 Identities = 67/67 (100%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 60 Query 426 TTGGCTA 432 ||||||| Sbjct 61 TTGGCTA 67 Score = 102 bits (112), Expect = 3e-19 Identities = 56/56 (100%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 381 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7681 CTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 7736 Score = 82.4 bits (90), Expect = 2e-13 Identities = 47/48 (98%), Gaps = 0/48 (0%) Strand=Plus/Plus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 15483 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGA 15530 >seq445 Length=212023 Score = 158 bits (174), Expect = 4e-36 Identities = 93/97 (96%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 ||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||| Sbjct 155936 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTCGCTTGAATTTCTTCACGTTGAA 155877 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||| Sbjct 155876 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 155840 Score = 116 bits (128), Expect = 1e-23 Identities = 70/74 (95%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||| ||| |||||| |||||||||||||| ||||||| Sbjct 179973 AGTAGATAGGGACAGTGGGAATCTCGCTAACCCATTCGTGCGCGTCACTAATAAGATGAC 179914 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 179913 GAGGCATTTGGCTA 179900 >seq3334 Length=6853 Score = 136 bits (150), Expect = 1e-29 Identities = 80/82 (98%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 246 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 305 Query 419 GAGGCATTTGGCTACCTTAAGA 440 |||||||||||||| |||||| Sbjct 306 GAGGCATTTGGCTA-GTTAAGA 326 Score = 84.2 bits (92), Expect = 7e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 6805 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAATTTC 6853 >seq2696 Length=4357 Score = 84.2 bits (92), Expect = 7e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 49 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGCTTGAAT 1 Score = 84.2 bits (92), Expect = 7e-14 Identities = 46/46 (100%), Gaps = 0/46 (0%) Strand=Plus/Minus Query 391 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 436 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4357 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTT 4312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635135115264