Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq434 383 5e-104 >seq434 Length=366605 Score = 383 bits (424), Expect = 5e-104 Identities = 411/536 (77%), Gaps = 38/536 (7%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 296571 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 296512 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 296511 TCCCCGTGCCGGGAGTGTGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 296452 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct 296451 TTCTCAGGCTCCCTCTCCGGAATCGAACACTGATTCCCCGTTACCCGTTATAACCATGGT 296392 Query 180 AGGC-CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 |||| || || |||||||||| |||||||| |||||| ||||||| || || ||||||| Sbjct 296391 AGGCGCAGAAT-CTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATCCGTCGCCGG 296333 Query 239 CTCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA----------------G 280 || |||||||| | |||||||| |||||||||| | Sbjct 296332 TAGGAGAGCATGCGATCAGCACAAAGTTATTCAGAATCACCAAAGTTAACGATGGACAGG 296273 Query 281 GAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC----GAAGTCGG- 335 | | | | || | | | || || ||||||| || ||||| ||||| Sbjct 296272 TAAACACCACCACCGATTGGTCTTGATTTAATAAAAGCATTTCTTCCATCTCTGGTCGGA 296213 Query 336 --GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTA 390 | || |||||||||||||||||||||||||| |||||||| ||| || | ||| Sbjct 296212 ACTCTAATTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGA-GTA 296154 Query 391 CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--G 448 | ||| || ||| || |||||||||||||||||||||| ||||||| || ||| | Sbjct 296153 CGATCTAAGGAACCATGACTGATTTAATGAGCCATTCGCGGTTTCACCTTA---ATTCGG 296097 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | | |||| || |||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 296096 CATGTACTGAG-CATGCATGACTTAATCTTTGAGACAAGCATATCACTACTGGCAG 296042 Score = 300 bits (332), Expect = 5e-79 Identities = 237/282 (84%), Gaps = 3/282 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| | || | | ||| || ||||| ||||| | ||||||||| Sbjct 108056 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 107997 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 107996 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 107937 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 107936 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 107877 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||| |||||||| |||||| ||||||| || | ||||||| Sbjct 107876 AGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATTCGTCGCCGGT 107817 Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA 279 | || ||||||||| | |||||||| || ||||||| Sbjct 107816 ACGAGACCATGCGATCAGCACAAAGTTATTCAGAGTCACCAA 107775 Score = 183 bits (202), Expect = 9e-44 Identities = 144/169 (85%), Gaps = 9/169 (5%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAA 397 || |||||||||||||||||||||||||| |||||||| ||| || || ||| ||| | Sbjct 107553 TTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGAG-TACGATCTA 107495 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATAC 455 | ||| ||||||||||||||||||||||||| ||||||| || ||| || | ||| Sbjct 107494 AGGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA---ATTCGGCATGTAC 107438 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 107437 TGAGACATGCATGGCTTAATCTTTGAGACAAGCATATTACTACTGGCAG 107389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510340067328