Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq434 383 5e-104
>seq434
Length=366605
Score = 383 bits (424), Expect = 5e-104
Identities = 411/536 (77%), Gaps = 38/536 (7%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||| ||||| | || | | ||| || ||||| ||||| | |||||||||
Sbjct 296571 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 296512
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||||| ||||| || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 296511 TCCCCGTGCCGGGAGTGTGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 296452
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
|||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||
Sbjct 296451 TTCTCAGGCTCCCTCTCCGGAATCGAACACTGATTCCCCGTTACCCGTTATAACCATGGT 296392
Query 180 AGGC-CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238
|||| || || |||||||||| |||||||| |||||| ||||||| || || |||||||
Sbjct 296391 AGGCGCAGAAT-CTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATCCGTCGCCGG 296333
Query 239 CTCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA----------------G 280
|| |||||||| | |||||||| |||||||||| |
Sbjct 296332 TAGGAGAGCATGCGATCAGCACAAAGTTATTCAGAATCACCAAAGTTAACGATGGACAGG 296273
Query 281 GAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC----GAAGTCGG- 335
| | | | || | | | || || ||||||| || ||||| |||||
Sbjct 296272 TAAACACCACCACCGATTGGTCTTGATTTAATAAAAGCATTTCTTCCATCTCTGGTCGGA 296213
Query 336 --GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTA 390
| || |||||||||||||||||||||||||| |||||||| ||| || | |||
Sbjct 296212 ACTCTAATTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGA-GTA 296154
Query 391 CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--G 448
| ||| || ||| || |||||||||||||||||||||| ||||||| || ||| |
Sbjct 296153 CGATCTAAGGAACCATGACTGATTTAATGAGCCATTCGCGGTTTCACCTTA---ATTCGG 296097
Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| | |||| || |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 296096 CATGTACTGAG-CATGCATGACTTAATCTTTGAGACAAGCATATCACTACTGGCAG 296042
Score = 300 bits (332), Expect = 5e-79
Identities = 237/282 (84%), Gaps = 3/282 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||| ||||| | || | | ||| || ||||| ||||| | |||||||||
Sbjct 108056 GTACTCATTCCGATTACGGGGCCTCGGATGAGTCCCGTATCGTTATTTTTCGTCACTACC 107997
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 107996 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 107937
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 107936 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTTACAACCATGGT 107877
Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239
|||| | ||||||||||| |||||||| |||||| ||||||| || | |||||||
Sbjct 107876 AGGCGCAGAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATTCGTCGCCGGT 107817
Query 240 TCAAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA 279
| || ||||||||| | |||||||| || |||||||
Sbjct 107816 ACGAGACCATGCGATCAGCACAAAGTTATTCAGAGTCACCAA 107775
Score = 183 bits (202), Expect = 9e-44
Identities = 144/169 (85%), Gaps = 9/169 (5%)
Strand=Plus/Minus
Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTACTATCAA 397
|| |||||||||||||||||||||||||| |||||||| ||| || || ||| ||| |
Sbjct 107553 TTTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTGAG-TACGATCTA 107495
Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT--GCTTATAC 455
| ||| ||||||||||||||||||||||||| ||||||| || ||| || | |||
Sbjct 107494 AGGAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTA---ATTCGGCATGTAC 107438
Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 107437 TGAGACATGCATGGCTTAATCTTTGAGACAAGCATATTACTACTGGCAG 107389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510340067328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |