Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq3839 230 6e-56 >seq3839 Length=10135 Score = 230 bits (254), Expect = 6e-56 Identities = 533/799 (67%), Gaps = 6/799 (1%) Strand=Plus/Minus Query 37651 AATGAAACAATATTTAGACTTGCTGCAAGACATCTTAGAAAACGG--CGTCGAAAAAGAA 37708 ||||||||| ||| | || ||| |||| | | | || | || || |||| | | Sbjct 1883 AATGAAACAGTATCTGGAATTGATGCAGAAGGTGCTTGATGAGGGAACGCCGAAG--GGA 1826 Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||| |||| ||| ||| || | ||| | ||||||| |||| | || ||||| | ||| Sbjct 1825 GACAGAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAA 1766 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 || || |||||||| ||||| || || | ||| | ||||| |||||| | || ||| Sbjct 1765 GACGGTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTG 1706 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 | ||||| | || || || || ||||| ||||| |||| || ||| || | ||| Sbjct 1705 TTGTGGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATT 1646 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 |||||||| ||||| || || || |||||||| || ||| | ||||| ||| |||||| Sbjct 1645 TGGGATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAGCAGTGGCGC 1586 Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATC 38008 | ||| | || || || || ||||| | | || | || || | Sbjct 1585 GCTTGGGGCGCGGCGGATGGTCGCCAGATTGACCAACTGCAAACCGTGCTGCAACAGTTA 1526 Query 38009 AAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGAC 38068 || | |||| |||||||||| | | || || ||||| || | || || || Sbjct 1525 AAGCAGGATCCAAATTCACGCCGTATCATTGTTTCTGCCTGGAACGTGGGTGAGTTAGAT 1466 Query 38069 GAGATGAAGCTGCCGCCGTGTCATTACGCCTTTC-AGTTCTATGTCGCCAACGGCCGGTT 38127 | ||| |||| | ||||| ||| || |||| | ||||| || || | ||| | Sbjct 1465 CAAATGGCGCTGGCACCGTGCCATG-CGTTTTTCCAATTCTACGTGGCGGATGGCAAACT 1407 Query 38128 GTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGC 38187 || || | | |||||||| |||| ||| | || ||||||| || || || Sbjct 1406 TTCCTGTCAGCTTTACCAGCGCTCGTGTGATGTGTTCCTCGGTCTGCCGTTCAATATTGC 1347 Query 38188 GAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAACT 38247 || || || ||| || ||||||| | || || || |||||| | || ||||| || | Sbjct 1346 CAGTTATGCACTGCTGGTGCATATGATGGCGCAGCAGTGCGACCTTGAAGTCGGCGACTT 1287 Query 38248 CATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCA 38307 | | ||||| || ||| |||| ||||||| || ||| |||| || || | |||| Sbjct 1286 TGTCTGGACCGGTGGTGACACCCATCTGTACAACAACCATATGGAGCAGACGCATTTGCA 1227 Query 38308 GCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTCTAT 38367 |||| || ||||| |||||||||| | | | ||||| || | || | Sbjct 1226 ACTGAGCCGTGAGCCAAAAGCGCTGCCGAAATTGATCATTAAACGCCGTCCTGCCTCGCT 1167 Query 38368 CTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGATTAA 38427 ||||||||| | | ||| || || ||||| | ||||||||||||||||| || || || Sbjct 1166 GTTTGACTATCAGTTCGATGATTTCGAAATAGAAGGCTACGATCCGCATCCTGCCATCAA 1107 Query 38428 AGCACCGGTGGCGGTTTAA 38446 |||||||||||| ||||| Sbjct 1106 GGCACCGGTGGCGATTTAA 1088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130633844243200