Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14 192 5e-44 seq320 107 2e-18 >seq14 Length=2234412 Score = 192 bits (212), Expect = 5e-44 Identities = 849/1328 (64%), Gaps = 36/1328 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| |||||||| || ||||| | || | || ||||| ||||||||||| || ||| Sbjct 776543 TCGACAGTGAACTGAATGGCATTGGTGGCAGGTTTAGTCCTGAGATAGTACATTCCAGTC 776484 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | ||||| |||| | |||||||||| || | | ||| || | || | | Sbjct 776483 TTCAATCCAGCTTCCCAACCGAAGAAATGCATGGACGTGAGTTTCTCAGTGGTTGGATTG 776424 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 |||| || | ||| | ||||| |||||||| || || ||||| |||||||| Sbjct 776423 GCCATGTGAACATTGAGTGACTGTGACTGATCGACAAAAGCCCCGCGATCAGCAGCCATT 776364 Query 65258 TCAATGATACGACGTCCCGATA-TCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | | ||| | | || | | |||||||||| || |||| || | | | | || Sbjct 776363 TTGAGGAT-CATCCTCTGGGGAATCTCCCAGACTGTTCTGTAGAGT-GCCTTGAGGTCTG 776306 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 ||| || |||||||| ||| | ||| ||| | || || || |||| ||| Sbjct 776305 CTGGTATTTCCTCAATACTCTGAATTGACCCATTATTCGCTATTATCAGATTCTTCATGT 776246 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||| | | ||| | || | | || || |||||| ||| || | Sbjct 776245 GATCGTCCCAGAGATTGCGATCAGTGAGGTCCCTCAGCAGATGGGGATTGACGACCTGAA 776186 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 | || || ||||| ||||| | | ||||||||| ||| ||| || | || || Sbjct 776185 ATTCACCAGACAGCACACGCCTGGAGTAGATGTTGCTGGTGTAGGGCTCGATGGCCTCGT 776126 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 |||| || || || ||||| || ||||| |||||||| || || | | || ||||| | Sbjct 776125 TGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCAGTAGCAGAGAGTTCC 776066 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGC--AATTCGTCCCAGTTCCACATCGGTTTATC 65613 | |||| || || || | | | || |||||| ||| | ||||| || Sbjct 776065 TGACCCCGTG--TTGAGATATTTTCTCCTTGAGTTTAGCCCAGTCCCAGA--GGTTTGTC 776010 Query 65614 GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673 | | | ||| |||||| || | || ||| | || ||| | || || || Sbjct 776009 GGTGTGA--CACC--CCACATGTCGTACTGGAGGATGCCCTGGCTGACTGGCGAGCCTTT 775954 Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAA 65733 | | | ||||| |||| ||| | ||| |||| |||| | ||| || || || | Sbjct 775953 GTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATGCCTCCAGGGCACCATA 775894 Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793 || | ||||||||| || | || |||| | |||||||| || ||| | || Sbjct 775893 GTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCATCACTGTCGAATGGATA 775834 Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 || |||||| | || | || |||||||| ||||||||||| || |||||||| || | Sbjct 775833 ACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGGACGGTGTCT 775774 Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913 || ||||| ||| ||||| || || |||||||||| ||||| | | | | Sbjct 775773 CATGTTGGAGACTCTTGCCTCCTCAACTGGATAGTAATTGACGTCGATGACCCTGTCGAG 775714 Query 65914 ATTGCGTGTCACCACATGCACGATACGTCGCAATTGT-TCGAAATCAAAATGTTTAGGAC 65972 ||| | || || || | |||| ||| | | | ||||| ||| |||| | Sbjct 775713 ATTTCTGGTGACAACTTTGACGACT-GTCTTGAGTTTGTCGAAGTCA-------TAGGTC 775662 Query 65973 GATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAG 66032 || | || || |||||||| || | || | ||||| | |||||||||| Sbjct 775661 T-TCTTCACTG---GAT-CCACAAACATGTTGACTGCTATCGATGCCAAATTGCAGACAG 775607 Query 66033 CTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGG 66092 | | || || || | ||||| || || |||||||||| || ||||| ||| | Sbjct 775606 CAACTTCATCGGGGCTCGAGTACTCAACGATCTCGGTGCACAAGTTGCTGCATTTTATTG 775547 Query 66093 TGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAG 66152 | || | |||| ||||| || | ||||| ||||||||||||| |||||| |||| Sbjct 775546 TTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTGTACAGCATGTAGGGAG 775487 Query 66153 TGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC----C 66208 | || ||||||||||| ||| | || || ||| || | || || ||| | Sbjct 775486 TTCCAGTCTCAACTTGTGACATTAGAATTGCTGTCCACAGCTCCCGGGCTGGCACTTGAC 775427 Query 66209 GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 | ||| || | ||| ||||| | | ||| || | ||||| |||||| Sbjct 775426 GCTTGTAACGAGCCTCCT----CCTCGTACTTTGTGTACAGCTTATCGAATTCCTCACCC 775371 Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || || | || | |||||||| ||| || |||||||| ||| ||| || Sbjct 775370 CAAGTGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAGACTCCAGGGACCGTCTGCC 775311 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 ||||| ||| || | ||| |||||||| ||||||||||| || || |||||||| Sbjct 775310 AGGACACGTTTCATGAACAAATCGGGTATCCACAGGGCGTAGAATAGCTCACGTGCTCGG 775251 Query 66389 TGCTCCTC 66396 | ||||| Sbjct 775250 TATTCCTC 775243 Score = 183 bits (202), Expect = 2e-41 Identities = 847/1328 (64%), Gaps = 36/1328 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||| || || ||||| |||| | ||| ||||| ||||||||||| || ||| Sbjct 232990 TCGACAGTGAATTGAATGGCATTGACAGCTGGCTTCGTCCTGAGATAGTACATCCCAGTC 232931 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197 || | ||||| |||| | |||||||||| || | | || || | || | Sbjct 232930 TTCAATCCAGCTTCCCAACCGAAGAAATGCATGGACGTGAGCTTCTCAGGGGTTGGACTG 232871 Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATG 65257 |||| || | ||| |||||| ||||||||| || || ||||| |||||||| Sbjct 232870 GCCATGTGAACATTGGTCGACTGGGACTGATCGATAAAAGCCCCTCGATCAGCAGCCATT 232811 Query 65258 TCAATGATACGACGTCCCGATA-TCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCAA 65315 | | ||| | | || | | |||||||||| || ||||||| | | | | || Sbjct 232810 TTCAGGAT-CATCCTCTGGGGAATCTCCCAGACTGTTCTGTACAGT-GCCTTGATGTCTG 232753 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 ||| || | ||| || ||||| || ||| || || || |||| ||| Sbjct 232752 CTGGTATTTTCTCGATACTCTGGATCGACCCATTGTTCGCTATTATCAGATTCTTCATGT 232693 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435 || ||| | | | || | || | | | | || |||||| ||| |||| Sbjct 232692 CGTCGTCCCAGAGATCGCGTTCAGTGAGGTCCTTCAGGAGATGGGGATTGACGACCTGGA 232633 Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495 | || || ||||| || || | | ||||||||| ||| ||| || | || || Sbjct 232632 ATTCACCAGACAGCACGCGCCTGGAGTAGATGTTGCTGGTGTAGGGCTCGATGGCCTCGT 232573 Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 |||| || || || ||||| || ||||| |||||||| || || | | || ||||| | Sbjct 232572 TGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCAGTAGCAGAGAGTTCC 232513 Query 65556 GCAATCCGTTCATTTCAATGTTGTGACGC--AATTCGTCCCAGTTCCACATCGGTTTATC 65613 | |||| || || || | | | || |||||| ||| | ||||| || Sbjct 232512 TGACCCCGTG--TTGAGATATTTTCTCCTTGAGTTTAGCCCAGTCCCAGA--GGTTTGTC 232457 Query 65614 GTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAG 65673 | | | ||| |||||| || | || ||| | || ||| | || || || Sbjct 232456 GGTGTGA--CACC--CCACATGTCGTACTGGAGGATGCCCTGGCTGACTGGCGAGCCTTT 232401 Query 65674 GAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAA 65733 | | | ||||| |||| ||| | ||| |||| |||| | ||| || || || | Sbjct 232400 GTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATGCCTCCAGGGCACCATA 232341 Query 65734 ATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCAT 65793 || | ||||||||| || | || |||| | |||||||| || ||| | || Sbjct 232340 GTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCATCACTGTCGAATGGATA 232281 Query 65794 ACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACG 65853 || |||||| | || | || |||||||| ||||||||||| || |||||||| || | Sbjct 232280 ACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGGACGGTGTCT 232221 Query 65854 CAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAA 65913 || ||||| ||| ||||| || || |||||||||| ||||| | | | | Sbjct 232220 CATGTTGGAGACTCTTGCCTCCTCAACTGGATAGTAATTGACGTCGATGACCCTGTCGAG 232161 Query 65914 ATTGCGTGTCACCACATGCACGATACGTCGCAATTGT-TCGAAATCAAAATGTTTAGGAC 65972 ||| | || || || | |||| ||| | | | ||||| ||| |||| | Sbjct 232160 ATTTCTGGTGACAACTTTGACGACT-GTCTTGAGTTTGTCGAAGTCA-------TAGGTC 232109 Query 65973 GATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAG 66032 || | || || |||||||| || | || | ||||| | |||||||||| Sbjct 232108 T-TCTTCACTG---GAT-CCACAAACATGTTGACTGCTATCGATGCCAAATTGCAGACAG 232054 Query 66033 CTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGG 66092 | | || || || | ||||| || || |||||||||| || ||||| ||| | Sbjct 232053 CAACTTCATCGGGGCTCGAGTACTCAACGATCTCGGTGCACAAGTTGCTGCATTTTATTG 231994 Query 66093 TGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAG 66152 | || | |||| ||||| || | ||||| ||||||||||||| |||||| |||| Sbjct 231993 TTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTGTACAGCATGTAGGGAG 231934 Query 66153 TGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC----C 66208 | || ||||||||||| ||| | || || ||| || | || || ||| | Sbjct 231933 TTCCAGTCTCAACTTGTGACATTAGAATTGCTGTCCACAGCTCACGGGCTGGCACTTGAC 231874 Query 66209 GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 | ||| || | ||| ||||| | | ||| || | ||||| |||||| Sbjct 231873 GCTTGTAACGAGCCTCCT----CCTCGTACTTTGTGTACAGCTTATCGAATTCCTCACCC 231818 Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || || | || | |||||||| ||| || ||||||| ||| ||| || Sbjct 231817 CAAGTGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAAACTCCAGGGACCGTCTGCC 231758 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 | ||||| ||| || | ||| |||||||| ||||||||||| || || |||||||| Sbjct 231757 TTGACACGTTTCATGAACAAATCGGGTATCCACAGGGCGTAGAACAGCTCACGTGCTCGG 231698 Query 66389 TGCTCCTC 66396 | ||||| Sbjct 231697 TATTCCTC 231690 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/203 (71%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 66424 GAAC-TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTT 66482 |||| || |||||||| || ||||| || |||||||||||||| || | || ||||| Sbjct 231570 GAACATCGAAGATGTCAGCGTGCCAGGGCTCCAGGTAGATGGCAAATGCCCCAGGACGTT 231511 Query 66483 TGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGA 66542 || ||||| || || || || || || || ||| | ||||| | ||| || || | Sbjct 231510 TGTTACCACCCTGATCAACATAACGTGCTGTGTTATTGTAAACACGAAGCATGGGCACAA 231451 Query 66543 GCCCGTTAGATTTGCCATTGGTGCCGTCGA-TGGGGGATCCTCGTGCCCGTATATCGTGA 66601 |||| || ||| ||||||||||||| | | | | | | ||| | || | || |||| Sbjct 231450 GCCCATTGGATATGCCATTGGTGCCAGCTATTCGTGTACCCTTG-GCTCTGATGCAGTGA 231392 Query 66602 ACATTCAGACCAATACCACCGGC 66624 ||||| | ||||| ||||| || Sbjct 231391 ACATTAACTCCAATGCCACCAGC 231369 >seq320 Length=265502 Score = 107 bits (118), Expect = 2e-18 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 61185 TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAA 61244 ||||| ||||||||| || || | || || ||||| || || || || || || || Sbjct 14744 TGAACGCCATTTCATTTCCCACGTACTAGCTTTTTTTGCTGCCTCAGATGGAATTGTGAA 14803 Query 61245 TGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTA 61304 ||||||| | ||||| | ||| |||||||||||||| | ||||| || || ||||| Sbjct 14804 TGAGAATCTTGTGGAAAGATTCAGTCAGGAGGTGCAAGTCACTGAGGCACGATGCTTCTA 14863 Query 61305 CGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTA 61346 || ||||| |||| ||||||||| | || || |||||||| Sbjct 14864 TGGATTCCAAGTTGCTATGGAGAATATACATTCTGAGATGTA 14905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397548773611520