Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq3788 203 1e-47
>seq3788
Length=28315
Score = 203 bits (224), Expect = 1e-47
Identities = 280/392 (71%), Gaps = 0/392 (0%)
Strand=Plus/Minus
Query 2521 TACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATCT 2580
||||| ||| | |||||||||| ||| |||||||| || |||||||||| |
Sbjct 941 TACCCGATCGTTTCTATCGAAGACGGTCTGGACGAATCTGATTGGGACGGTTTTGCTTAC 882
Query 2581 CTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAAC 2640
| || || || || | ||| | || |||||||||||||| | |||||||| |||
Sbjct 881 CAGACCAAAGTACTGGGCGACAAAATCCAGCTGGTTGGTGACGACCTGTTCGTAACCAAC 822
Query 2641 ACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCAAAGTT 2700
|| ||| || |||| || | | || | |||||||| ||||| |||||| ||
Sbjct 821 ACCAAGATCCTGAAAGAAGGCATCGAAAAAGGCATCGCTAACTCCATCCTGATCAAATTT 762
Query 2701 AACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGGA 2760
||||| |||||| || || | |||||| | | |||||| | ||||||||||| | ||
Sbjct 761 AACCAGATCGGTTCTCTGTCCGAAACTCTGGCTGCTATCAAGATGGCGAAAGATGTGGGC 702
Query 2761 TACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATT 2820
||||| || || | || |||||||| || ||||| ||||| | || ||||| ||| |
Sbjct 701 TACACTGCCGTTATCTCTCACCGTTCTGGCGAAACCGAAGACGCTACCATCGCCGATCTG 642
Query 2821 GCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATT 2880
|| || | ||| |||||||| || || || ||||| || ||| |||| || ||
Sbjct 641 GCGGTAGGTACTGCGGCTGGTCAGATCAAAACCGGTTCCATGAGCCGTTCTGATCGCGTT 582
Query 2881 GCTAAATACAACCAATTGCTTCGTATCGAAGA 2912
|| || ||||||||| || | |||||||||||
Sbjct 581 GCCAAGTACAACCAACTGATCCGTATCGAAGA 550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156031047470592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |