Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq3788 203 1e-47 >seq3788 Length=28315 Score = 203 bits (224), Expect = 1e-47 Identities = 280/392 (71%), Gaps = 0/392 (0%) Strand=Plus/Minus Query 2521 TACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATCT 2580 ||||| ||| | |||||||||| ||| |||||||| || |||||||||| | Sbjct 941 TACCCGATCGTTTCTATCGAAGACGGTCTGGACGAATCTGATTGGGACGGTTTTGCTTAC 882 Query 2581 CTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAAC 2640 | || || || || | ||| | || |||||||||||||| | |||||||| ||| Sbjct 881 CAGACCAAAGTACTGGGCGACAAAATCCAGCTGGTTGGTGACGACCTGTTCGTAACCAAC 822 Query 2641 ACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCAAAGTT 2700 || ||| || |||| || | | || | |||||||| ||||| |||||| || Sbjct 821 ACCAAGATCCTGAAAGAAGGCATCGAAAAAGGCATCGCTAACTCCATCCTGATCAAATTT 762 Query 2701 AACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGGA 2760 ||||| |||||| || || | |||||| | | |||||| | ||||||||||| | || Sbjct 761 AACCAGATCGGTTCTCTGTCCGAAACTCTGGCTGCTATCAAGATGGCGAAAGATGTGGGC 702 Query 2761 TACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATT 2820 ||||| || || | || |||||||| || ||||| ||||| | || ||||| ||| | Sbjct 701 TACACTGCCGTTATCTCTCACCGTTCTGGCGAAACCGAAGACGCTACCATCGCCGATCTG 642 Query 2821 GCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATT 2880 || || | ||| |||||||| || || || ||||| || ||| |||| || || Sbjct 641 GCGGTAGGTACTGCGGCTGGTCAGATCAAAACCGGTTCCATGAGCCGTTCTGATCGCGTT 582 Query 2881 GCTAAATACAACCAATTGCTTCGTATCGAAGA 2912 || || ||||||||| || | ||||||||||| Sbjct 581 GCCAAGTACAACCAACTGATCCGTATCGAAGA 550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156031047470592