Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq3282 122 3e-23 seq2452 109 2e-19 >seq3282 Length=7904 Score = 122 bits (134), Expect = 3e-23 Identities = 180/255 (71%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 33660 CCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTC 33719 |||||| | ||||||| |||||||||| ||| || ||||||||||| | || || || Sbjct 7521 CCATTTACGCGTGCGCAGTTGACCTTCAACATACACCTGTGAGCCTTTGCGCAGGTATTC 7462 Query 33720 ACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTT 33779 ||||| | |||||| ||||| || | | |||||||||||||| || |||| || Sbjct 7461 TCCAGCCACTTCAGCCAGCTTTCCGTACAGCGTGACGCGGTGCCATTCTGTGCGCTCTTT 7402 Query 33780 TTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAAC 33839 | |||||| || ||| || ||| | || || || || | || | ||| ||||| Sbjct 7401 CTGCTCACCGGTCTGCTTGTCGCGCCAGGTATCTGACGTGGCCAGAGTCAGGTTAGCAAC 7342 Query 33840 AGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCCTGGCCTAATGTGCCGAGGATGAT 33899 || || || || |||| || || ||||| ||||| || || | | |||| | || Sbjct 7341 GGCACCACCGTTCGGCAGATAACGGACTTCCGGGTCTTGCCCCAGATTCCCGACAAGAAT 7282 Query 33900 TACTTTATTTACGCC 33914 |||||||| ||||| Sbjct 7281 CACTTTATTAACGCC 7267 >seq2452 Length=2364 Score = 109 bits (120), Expect = 2e-19 Identities = 247/366 (67%), Gaps = 9/366 (2%) Strand=Plus/Minus Query 33550 TGCCTTTGCTGCGGGCTATCATCGCGCTTACCGCCAATCATTTGCATCACACCACCCATT 33609 |||||| ||||| || ||| | |||||||||||| ||| ||||| || || || Sbjct 2226 TGCCTT-GCTGCCCGCCATCCT---GCTTACCGCCAAGCATCTGCATTGATCCGCCAAT- 2172 Query 33610 TGCTGGATAACAATTTCTGTGGTGTATTTTTCAACTCCAGCATTATCAGTCCATTTTCTA 33669 | || ||| | ||| || |||||| | || || | | || ||| || || Sbjct 2171 --ATCGACAACTACTTCCGTTGTGTATCTGTCTTGCCCTGACTGGTCTTGCCACTTCCTT 2114 Query 33670 GTGCGCAACTGACCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATT 33729 |||||||| || || || | ||| || || || || || | ||||| |||||||| | Sbjct 2113 GTGCGCAATTGGCCCTCGATATATACCTGCGAACCCTTGCGTAGATATTCACCAGCCACC 2054 Query 33730 TCAGCGAGCTTGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCA 33789 || || | ||| || | | ||||| |||||||| || ||||||| | ||| ||| Sbjct 2053 TCTGCCAACTTTCCGTACAGCGTGACGCGATGCCATTCCGTGCGCTCCTTCTGCTCTCCA 1994 Query 33790 GTAGCCTTATCATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCA 33849 || ||| || ||||||| || || || || |||| | ||| || || || | || Sbjct 1993 GTCTGCTTGTCTCTCCATGAATCAGAAGTGGCTACAGTCAGGTTTGCCACTGCCCATCCG 1934 Query 33850 TTTGGCATGTATCGCACTTCTGGGTCCTGGCCTA-ATGTGCCGAGGATGATTACTTTATT 33908 | || |||| ||||||| ||||| || || | ||| || | || || ||||| || Sbjct 1933 CTCGGTGTGTAGCGCACTTTGGGGTCTTGCCCGAGGTGT-CCCACGAGAATCACTTTGTT 1875 Query 33909 TACGCC 33914 |||||| Sbjct 1874 TACGCC 1869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144965968881664