Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22]
161,988 sequences; 485,705,082 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq1995 163 6e-38
seq3357 93.3 8e-17
>seq1995
Length=54681
Score = 163 bits (180), Expect = 6e-38
Identities = 233/325 (72%), Gaps = 5/325 (2%)
Strand=Plus/Plus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||||||| ||||| || | || ||||| | || ||||| || | ||||
Sbjct 48763 AGGGGAGTGAAATAGATTCTGAAACCATGTGCATACAAACAGTAGGAGCAGATTTATTCT 48822
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
||||| |||| ||||||| |||||| | | ||| ||| | ||| || || ||||
Sbjct 48823 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTCAGTGGCAAGCTTAACC 48881
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCG 189
| | | || || || |||| |||| | |||||||||| ||| |||
Sbjct 48882 GAAAATAG---GGGAGGCGCAGAGAAATCGAGTCCGAACAGGGCGAATTAGTCTCTGGAT 48938
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
||||| ||||||| ||||||||| | | ||| |||||| |||||||| ||| ||
Sbjct 48939 ATAGACCCGAAACCAAGTGATCTACTTATGGCCAGATTGAAGGTGCGGTAACACGTACTG 48998
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
||||| |||||| || |||||||| || |||||| | | ||||||||||||||
Sbjct 48999 GAGGATCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGAGTAGGGGTGAAAGG 49058
Query 310 CCAATCAAACTGGGAAATAGCTCGT 334
|||| |||||| |||||||||| ||
Sbjct 49059 CCAAACAAACTTGGAAATAGCTGGT 49083
>seq3357
Length=19165
Score = 93.3 bits (102), Expect = 8e-17
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
||||| ||||||| | |||||| ||| || |||||||||| ||| | |||
Sbjct 2242 TAGACCCGAAACCGAGCGATCTATCCATGAACAGGTTGAAGGTAATATAATCATTACTGG 2301
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
|||||||||| |||| |||| ||| ||| ||||| | | || ||||||||||||||
Sbjct 2302 AGGACCGAACTGGTATCTGTTGCAAAAGATTCAGATGATTTGTGGATAGGGGTGAAAGGC 2361
Query 311 CAATCAAACTGGGAAATAGCTCGT 334
|||||| || ||| |||||| ||
Sbjct 2362 TAATCAAGCTCGGAGATAGCTGGT 2385
Score = 93.3 bits (102), Expect = 8e-17
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
||||| ||||||| | |||||| ||| || |||||||||| ||| | |||
Sbjct 9905 TAGACCCGAAACCGAGCGATCTATCCATGAACAGGTTGAAGGTAATATAATCATTACTGG 9964
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
|||||||||| |||| |||| ||| ||| ||||| | | || ||||||||||||||
Sbjct 9965 AGGACCGAACTGGTATCTGTTGCAAAAGATTCAGATGATTTGTGGATAGGGGTGAAAGGC 10024
Query 311 CAATCAAACTGGGAAATAGCTCGT 334
|||||| || ||| |||||| ||
Sbjct 10025 TAATCAAGCTCGGAGATAGCTGGT 10048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 971224180736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |