Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22]
161,988 sequences; 485,705,082 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq4043 295 1e-77
seq1517 89.7 9e-16
>seq4043
Length=12931
Score = 295 bits (326), Expect = 1e-77
Identities = 221/258 (86%), Gaps = 1/258 (0%)
Strand=Plus/Plus
Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120
|||| | | || |||||| |||| |||||||||||||||||||||||||| || ||||
Sbjct 7495 GGGAACTATGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTACGCCGGAAT 7554
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
||||||||||||||||||| ||||||||| | | ||||||||||||||||| ||| |||
Sbjct 7555 ACATTAGCATGGAATAATAAAATAGGACGAGTGATTCTATTTTGTTGGTTTATAGAACCA 7614
Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240
||||||||||||||||| | ||| ||||| | |||||||| ||| |||||||||||||
Sbjct 7615 CCGTAATGATTAATAGGAACAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 7674
Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| |
Sbjct 7675 TTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAAT-A 7733
Query 301 GTGAACGAAAGTTAGGGG 318
| |||| ||| ||||
Sbjct 7734 AAGGACGATGGTTGGGGG 7751
>seq1517
Length=79253
Score = 89.7 bits (98), Expect = 9e-16
Identities = 154/217 (71%), Gaps = 14/217 (6%)
Strand=Plus/Minus
Query 113 GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT----GT-- 165
|| ||||||| | |||| |||||| ||||||||||| |||||| | || ||
Sbjct 10818 GCCCGAATACTGTGTGCATAGAATAACTGAATAGGACGT-CGGTTCCAGTTACGAGGTGA 10760
Query 166 --TGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCA 221
|||||| | ||| ||| |||||||||||| ||||| | |||||| | |||||
Sbjct 10759 AGTGGTTT-TCGGAACCCGACGTAATGATTAACAGGGACGGGCGGGGGCATTCGTATTGC 10701
Query 222 ATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCA 281
|| ||||||||||||||| ||| ||||| ||| ||||||||||| |||
Sbjct 10700 GACGTTAGAGGTGAAATTCTTAGATCGTCGCAAGACGAACCGAAGCGAAAGCGTTTGCCA 10641
Query 282 AGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| | || | || |||| ||||||||||||| ||
Sbjct 10640 AGTACGTCCCCGTTGATCA-AGAACGAAAGTTAGAGG 10605
Score = 89.7 bits (98), Expect = 9e-16
Identities = 154/217 (71%), Gaps = 14/217 (6%)
Strand=Plus/Minus
Query 113 GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT----GT-- 165
|| ||||||| | |||| |||||| ||||||||||| |||||| | || ||
Sbjct 52400 GCCCGAATACTGTGTGCATAGAATAACTGAATAGGACGT-CGGTTCCAGTTACGAGGTGA 52342
Query 166 --TGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCA 221
|||||| | ||| ||| |||||||||||| ||||| | |||||| | |||||
Sbjct 52341 AGTGGTTT-TCGGAACCCGACGTAATGATTAACAGGGACGGGCGGGGGCATTCGTATTGC 52283
Query 222 ATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCA 281
|| ||||||||||||||| ||| ||||| ||| ||||||||||| |||
Sbjct 52282 GACGTTAGAGGTGAAATTCTTAGATCGTCGCAAGACGAACCGAAGCGAAAGCGTTTGCCA 52223
Query 282 AGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|| | || | || |||| ||||||||||||| ||
Sbjct 52222 AGTACGTCCCCGTTGATCA-AGAACGAAAGTTAGAGG 52187
Score = 75.2 bits (82), Expect = 2e-11
Identities = 153/222 (69%), Gaps = 18/222 (8%)
Strand=Plus/Minus
Query 113 GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-------- 163
|| ||||||| | |||| |||||| ||| ||||||| |||||| | |||
Sbjct 72796 GCCCGAATACTGTGTGCATAGAATAACTGAAGAGGACGT-CGGTTCCAGTTTACAGAGGT 72738
Query 164 GT----TGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGT-CGGGGGTGTCAGT 216
|| |||||| ||| ||| |||||||||||| ||||| | |||||| | ||
Sbjct 72737 GTGAAGTGGTTTAACGGAACCCGACGTAATGATTAACAGGGACGGCGCGGGGGCATTCGT 72678
Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276
| | || ||||||||||||||||||| ||||| ||| |||||||||||
Sbjct 72677 ACTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACCGAAGCGAAAGCGTT 72618
Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||| | || | || |||| ||||||||||||| ||
Sbjct 72617 TGCCAAGTACGTCCCCGTTGATCA-AGAACGAAAGTTAGAGG 72577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913717485824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |