Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq4043 295 1e-77 seq1517 89.7 9e-16 >seq4043 Length=12931 Score = 295 bits (326), Expect = 1e-77 Identities = 221/258 (86%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120 |||| | | || |||||| |||| |||||||||||||||||||||||||| || |||| Sbjct 7495 GGGAACTATGAATTTTACCTTGAGAAAATTAGAGTGTTCAAAGCAGGCCTACGCCGGAAT 7554 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 ||||||||||||||||||| ||||||||| | | ||||||||||||||||| ||| ||| Sbjct 7555 ACATTAGCATGGAATAATAAAATAGGACGAGTGATTCTATTTTGTTGGTTTATAGAACCA 7614 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||||||| | ||| ||||| | |||||||| ||| ||||||||||||| Sbjct 7615 CCGTAATGATTAATAGGAACAGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTC 7674 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| | Sbjct 7675 TTGGATTTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAAT-A 7733 Query 301 GTGAACGAAAGTTAGGGG 318 | |||| ||| |||| Sbjct 7734 AAGGACGATGGTTGGGGG 7751 >seq1517 Length=79253 Score = 89.7 bits (98), Expect = 9e-16 Identities = 154/217 (71%), Gaps = 14/217 (6%) Strand=Plus/Minus Query 113 GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT----GT-- 165 || ||||||| | |||| |||||| ||||||||||| |||||| | || || Sbjct 10818 GCCCGAATACTGTGTGCATAGAATAACTGAATAGGACGT-CGGTTCCAGTTACGAGGTGA 10760 Query 166 --TGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCA 221 |||||| | ||| ||| |||||||||||| ||||| | |||||| | ||||| Sbjct 10759 AGTGGTTT-TCGGAACCCGACGTAATGATTAACAGGGACGGGCGGGGGCATTCGTATTGC 10701 Query 222 ATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCA 281 || ||||||||||||||| ||| ||||| ||| ||||||||||| ||| Sbjct 10700 GACGTTAGAGGTGAAATTCTTAGATCGTCGCAAGACGAACCGAAGCGAAAGCGTTTGCCA 10641 Query 282 AGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || | || | || |||| ||||||||||||| || Sbjct 10640 AGTACGTCCCCGTTGATCA-AGAACGAAAGTTAGAGG 10605 Score = 89.7 bits (98), Expect = 9e-16 Identities = 154/217 (71%), Gaps = 14/217 (6%) Strand=Plus/Minus Query 113 GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT----GT-- 165 || ||||||| | |||| |||||| ||||||||||| |||||| | || || Sbjct 52400 GCCCGAATACTGTGTGCATAGAATAACTGAATAGGACGT-CGGTTCCAGTTACGAGGTGA 52342 Query 166 --TGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCA 221 |||||| | ||| ||| |||||||||||| ||||| | |||||| | ||||| Sbjct 52341 AGTGGTTT-TCGGAACCCGACGTAATGATTAACAGGGACGGGCGGGGGCATTCGTATTGC 52283 Query 222 ATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCA 281 || ||||||||||||||| ||| ||||| ||| ||||||||||| ||| Sbjct 52282 GACGTTAGAGGTGAAATTCTTAGATCGTCGCAAGACGAACCGAAGCGAAAGCGTTTGCCA 52223 Query 282 AGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || | || | || |||| ||||||||||||| || Sbjct 52222 AGTACGTCCCCGTTGATCA-AGAACGAAAGTTAGAGG 52187 Score = 75.2 bits (82), Expect = 2e-11 Identities = 153/222 (69%), Gaps = 18/222 (8%) Strand=Plus/Minus Query 113 GCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-------- 163 || ||||||| | |||| |||||| ||| ||||||| |||||| | ||| Sbjct 72796 GCCCGAATACTGTGTGCATAGAATAACTGAAGAGGACGT-CGGTTCCAGTTTACAGAGGT 72738 Query 164 GT----TGGTTTCTAGGA--CCGCCGTAATGATTAATAGGGATAGT-CGGGGGTGTCAGT 216 || |||||| ||| ||| |||||||||||| ||||| | |||||| | || Sbjct 72737 GTGAAGTGGTTTAACGGAACCCGACGTAATGATTAACAGGGACGGCGCGGGGGCATTCGT 72678 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 | | || ||||||||||||||||||| ||||| ||| ||||||||||| Sbjct 72677 ACTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACCGAAGCGAAAGCGTT 72618 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||| | || | || |||| ||||||||||||| || Sbjct 72617 TGCCAAGTACGTCCCCGTTGATCA-AGAACGAAAGTTAGAGG 72577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 913717485824