Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22]
161,988 sequences; 485,705,082 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq3357 80.6 4e-13
>seq3357
Length=19165
Score = 80.6 bits (88), Expect = 4e-13
Identities = 170/250 (68%), Gaps = 8/250 (3%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTAC-CGTCTTCGCAC 60
||| ||| ||| |||||||||||||||| || |||||||| |||| ||| | |||
Sbjct 3383 TTAACCTACCAGCACCGGGCAGGCGTCACACCCTATACATCCGTTTACACGT--TAGCAG 3326
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||||| |||||||| || || || |||| ||| | | | |
Sbjct 3325 AGTGCTGTGTTTTTAATAAACAGTTGCAGCCACCTTACCTCTTAGACTAGTTCTCTATAA 3266
Query 121 ACACGTCGTTCACCAGC--AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCG 178
| | | | | | |||| | |||||| |||||||| | ||||||||
Sbjct 3265 AAAATTTTATAAATAATCTAGTGTATC---TTCTCCAAAAGTTACGATACTATTTTGCCT 3209
Query 179 AATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCG 238
| |||||| | || | | ||||| |||||||||||||| | | ||||||||||
Sbjct 3208 AGTTCCTTCATTTAGATTATCTCAAACGCTTTAGTATTCTCTACTTAATTACCTGTGTCG 3149
Query 239 GTTTACGGTA 248
||||||||||
Sbjct 3148 GTTTACGGTA 3139
Score = 80.6 bits (88), Expect = 4e-13
Identities = 170/250 (68%), Gaps = 8/250 (3%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTAC-CGTCTTCGCAC 60
||| ||| ||| |||||||||||||||| || |||||||| |||| ||| | |||
Sbjct 11046 TTAACCTACCAGCACCGGGCAGGCGTCACACCCTATACATCCGTTTACACGT--TAGCAG 10989
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||||| |||||||| || || || |||| ||| | | | |
Sbjct 10988 AGTGCTGTGTTTTTAATAAACAGTTGCAGCCACCTTACCTCTTAGACTAGTTCTCTATAA 10929
Query 121 ACACGTCGTTCACCAGC--AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCG 178
| | | | | | |||| | |||||| |||||||| | ||||||||
Sbjct 10928 AAAATTTTATAAATAATCTAGTGTATC---TTCTCCAAAAGTTACGATACTATTTTGCCT 10872
Query 179 AATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCG 238
| |||||| | || | | ||||| |||||||||||||| | | ||||||||||
Sbjct 10871 AGTTCCTTCATTTAGATTATCTCAAACGCTTTAGTATTCTCTACTTAATTACCTGTGTCG 10812
Query 239 GTTTACGGTA 248
||||||||||
Sbjct 10811 GTTTACGGTA 10802
Score = 80.6 bits (88), Expect = 4e-13
Identities = 170/250 (68%), Gaps = 8/250 (3%)
Strand=Plus/Minus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTAC-CGTCTTCGCAC 60
||| ||| ||| |||||||||||||||| || |||||||| |||| ||| | |||
Sbjct 18168 TTAACCTACCAGCACCGGGCAGGCGTCACACCCTATACATCCGTTTACACGT--TAGCAG 18111
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| ||||||||||| |||||||| || || || |||| ||| | | | |
Sbjct 18110 AGTGCTGTGTTTTTAATAAACAGTTGCAGCCACCTTACCTCTTAGACTAGTTCTCTATAA 18051
Query 121 ACACGTCGTTCACCAGC--AGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCG 178
| | | | | | |||| | |||||| |||||||| | ||||||||
Sbjct 18050 AAAATTTTATAAATAATCTAGTGTATC---TTCTCCAAAAGTTACGATACTATTTTGCCT 17994
Query 179 AATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCG 238
| |||||| | || | | ||||| |||||||||||||| | | ||||||||||
Sbjct 17993 AGTTCCTTCATTTAGATTATCTCAAACGCTTTAGTATTCTCTACTTAATTACCTGTGTCG 17934
Query 239 GTTTACGGTA 248
||||||||||
Sbjct 17933 GTTTACGGTA 17924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693310306724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |