Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1995 179 7e-43 seq3357 111 3e-22 >seq1995 Length=54681 Score = 179 bits (198), Expect = 7e-43 Identities = 209/281 (74%), Gaps = 1/281 (0%) Strand=Plus/Plus Query 59 ATACTACCCCTGTTGTATTGGATTTCTAACCGGACGACGTATAACCGTTGACGGGACAGT 118 |||| |||| ||| ||| | |||||||| | ||| || ||| | |||||| | Sbjct 50423 ATACCACCCTGGTTTGTTTGAAATTCTAACCTTAAACCGT-TATCCGGTTTGGGGACAAT 50481 Query 119 GTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAG 178 || | |||||||||||||||||||||| ||||| ||||||||||||||| | | ||| Sbjct 50482 GTATGGTGGGCAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGTTCTAAG 50541 Query 179 ATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTG 238 ||| || || || ||||| | | | | ||||||| |||| ||| ||| || |||| Sbjct 50542 GTACGCTAAGTACGGTCGGAAATCGTACTAATAGTGCAATGGCATAAGCGTGCTTAACTG 50601 Query 239 CGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATG 298 ||| || |||||| ||||| |||||||| || | || ||||||| || ||| ||| Sbjct 50602 CGAGACTGACAAGTCGAGCAGATACGAAAGTAGGACATAGTGATCCGATAGTTCTGTATG 50661 Query 299 GAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| ||| |||||| ||| ||||||| ||| ||||||||| Sbjct 50662 GAAGGGCTATCGCTCAACGAATAAAAGGTACTCTGGGGATA 50702 >seq3357 Length=19165 Score = 111 bits (122), Expect = 3e-22 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 116 AGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCA 175 ||||| | |||| |||||||||||||||||| ||||| ||| ||||||||||| | || Sbjct 3757 AGTGTGTGGCGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAAAGTAACGGAGGAGTACA 3816 Query 176 AAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGA 235 ||| |||||||| | |||||| | | | || || ||| | ||||| || | Sbjct 3817 AAGGTACCCTCAATACGTTTGGAAATCGTATGTTGAGCATAAGAGCATATGGGTGCTTAA 3876 Query 236 CTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGA 295 ||| | | || || | ||| |||||||| || || ||||||| | ||| Sbjct 3877 CTGTAAGATAGACATATCAAACAGATACGAAAGTAGGTTCTAGTGATCCGATAATTCTGT 3936 Query 296 ATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| || |||||| ||||||||||| ||| | ||||||| Sbjct 3937 ATGGAAAGGTTATCGCTCAACGGATAAAAGGTACTCCGGGGATA 3980 Score = 111 bits (122), Expect = 3e-22 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 116 AGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCA 175 ||||| | |||| |||||||||||||||||| ||||| ||| ||||||||||| | || Sbjct 11420 AGTGTGTGGCGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAAAGTAACGGAGGAGTACA 11479 Query 176 AAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGA 235 ||| |||||||| | |||||| | | | || || ||| | ||||| || | Sbjct 11480 AAGGTACCCTCAATACGTTTGGAAATCGTATGTTGAGCATAAGAGCATATGGGTGCTTAA 11539 Query 236 CTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGA 295 ||| | | || || | ||| |||||||| || || ||||||| | ||| Sbjct 11540 CTGTAAGATAGACATATCAAACAGATACGAAAGTAGGTTCTAGTGATCCGATAATTCTGT 11599 Query 296 ATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| || |||||| ||||||||||| ||| | ||||||| Sbjct 11600 ATGGAAAGGTTATCGCTCAACGGATAAAAGGTACTCCGGGGATA 11643 Score = 111 bits (122), Expect = 3e-22 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 116 AGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCA 175 ||||| | |||| |||||||||||||||||| ||||| ||| ||||||||||| | || Sbjct 18542 AGTGTGTGGCGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAAAGTAACGGAGGAGTACA 18601 Query 176 AAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGA 235 ||| |||||||| | |||||| | | | || || ||| | ||||| || | Sbjct 18602 AAGGTACCCTCAATACGTTTGGAAATCGTATGTTGAGCATAAGAGCATATGGGTGCTTAA 18661 Query 236 CTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGA 295 ||| | | || || | ||| |||||||| || || ||||||| | ||| Sbjct 18662 CTGTAAGATAGACATATCAAACAGATACGAAAGTAGGTTCTAGTGATCCGATAATTCTGT 18721 Query 296 ATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| || |||||| ||||||||||| ||| | ||||||| Sbjct 18722 ATGGAAAGGTTATCGCTCAACGGATAAAAGGTACTCCGGGGATA 18765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980808629888