Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1995 226 6e-57 seq3357 192 1e-46 >seq1995 Length=54681 Score = 226 bits (250), Expect = 6e-57 Identities = 267/353 (76%), Gaps = 20/353 (6%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTT-CACACACGCGGCATTGGCTGGATCAGGCTTTCGCC 59 |||||||| || ||| ||||||| | ||| |||||||||| |||||||||||||||||| Sbjct 47001 CTTTACAACCCTAAGGCCTTCTTCACTCACGCGCGGCATTG-CTGGATCAGGCTTTCGCC 46943 Query 60 CATTGT-CCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 |||||| |||| |||||||||||||||||||||||||||||||| | |||||||||| || Sbjct 46942 CATTGTTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGC-GTGTCTCAGTCCC 46884 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGC-CATTACC 177 |||||| ||||||||||||||||||||| ||| ||||| | |||||| || ||||| Sbjct 46883 AGTGTGGCTGATCATCCTCTCAGACCAGCTACTGATCGCGGTCTTGGTAGGCTTTTTACC 46824 Query 178 TCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGG-----------CCCG 226 ||||||||| |||||| || | ||| || | ||| |||| | Sbjct 46823 CCACCAACTAACTAATCAGATATCGGCCGCTCCAAAAGCATAAGGTTTTTAAAAATACTA 46764 Query 227 AAGGTCCCCTGCTTTCTCCCGTAG-GACGTATGCGGTATTAGCGTCCGTTTCCGAAC--G 283 || |||||| |||| | ||| ||||||||||||||| | ||| ||| | Sbjct 46763 AAAATCCCCTATTTTCATCGTTAGATTTGTATGCGGTATTAGC-TAATTTTTTCAACTAG 46705 Query 284 TTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 |||||||||||| || | |||| | ||||||||||||| |||| ||| Sbjct 46704 TTATCCCCCACTTAAGGGTACGTTCCGATATATTACTCACCCGTTCGCCACTC 46652 >seq3357 Length=19165 Score = 192 bits (212), Expect = 1e-46 Identities = 246/335 (73%), Gaps = 8/335 (2%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| || ||| ||||||| |||||||||| ||| | |||||||| ||| |||| || Sbjct 482 TTTACAACCCTAAGGCCTTCTT-CACACACGCGACATAG-CTGGATCAAGCTCTCGCTCA 425 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||||||||||||||||||||||||| || || ||| ||| |||||||||||| ||| | Sbjct 424 TTGTCCAATATTCCCCACTGCTGCCTTCCTTAAAAGTTTGGGCCGTGTCTCAGTCCCAAT 365 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| || ||||||||| |||||| |||||||| | | |||| | | | |||| | | Sbjct 364 GTGGTTGTTCATCCTCTAAGACCAACTACGGATCATAGTCTTGTTAAACATTTACTTTAA 305 Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241 |||||| ||||||||| | |||| ||| |||| | ||| | |||| | |||| Sbjct 304 CAACTAACTAATCCGATACAAGCTCTTCTATTAGCATATGGC-----GTTCCCATACTTT 250 Query 242 CTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTC-CGAACGTTATCCCCCACTACCAG 300 ||| ||||| ||| | |||| | | |||| | || || |||| || Sbjct 249 ATCCATTAGGATTTATATTGAATTACTATACATTTCTATATACTTTTCTAATACTAAAAG 190 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 |||||||| | |||||||||||| ||| ||| Sbjct 189 GCAGATTCTTGTATTTTACTCACCCGTTCGCTGCT 155 Score = 192 bits (212), Expect = 1e-46 Identities = 246/335 (73%), Gaps = 8/335 (2%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||||| || ||| ||||||| |||||||||| ||| | |||||||| ||| |||| || Sbjct 8145 TTTACAACCCTAAGGCCTTCTT-CACACACGCGACATAG-CTGGATCAAGCTCTCGCTCA 8088 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||||||||||||||||||||||||| || || ||| ||| |||||||||||| ||| | Sbjct 8087 TTGTCCAATATTCCCCACTGCTGCCTTCCTTAAAAGTTTGGGCCGTGTCTCAGTCCCAAT 8028 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| || ||||||||| |||||| |||||||| | | |||| | | | |||| | | Sbjct 8027 GTGGTTGTTCATCCTCTAAGACCAACTACGGATCATAGTCTTGTTAAACATTTACTTTAA 7968 Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241 |||||| ||||||||| | |||| ||| |||| | ||| | |||| | |||| Sbjct 7967 CAACTAACTAATCCGATACAAGCTCTTCTATTAGCATATGGC-----GTTCCCATACTTT 7913 Query 242 CTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTC-CGAACGTTATCCCCCACTACCAG 300 ||| ||||| ||| | |||| | | |||| | || || |||| || Sbjct 7912 ATCCATTAGGATTTATATTGAATTACTATACATTTCTATATACTTTTCTAATACTAAAAG 7853 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 |||||||| | |||||||||||| ||| ||| Sbjct 7852 GCAGATTCTTGTATTTTACTCACCCGTTCGCTGCT 7818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1070263488640