Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1995 304 5e-80 seq3357 122 3e-25 >seq1995 Length=54681 Score = 304 bits (336), Expect = 5e-80 Identities = 380/513 (74%), Gaps = 20/513 (4%) Strand=Plus/Minus Query 91 CCCCCTAGACCATC-CAGTGCTCTACCTCCGGGAA--GAAACACGCGACGCTGCACCTAA 147 |||||||| |||| |||||||||||| || || | || || | || |||||| Sbjct 49155 CCCCCTAG-CCATAACAGTGCTCTACCCCC---AATGGTAATACTTAAGGCACTACCTAA 49100 Query 148 ATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACA 207 || |||||| ||||||||||||| | ||||||| ||||||||||||||||| |||| Sbjct 49099 ATAGTTTTCGGAGAGAACCAGCTATTTCCAAGTTTGTTTGGCCTTTCACCCCTACTCACA 49040 Query 208 GGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGC 267 | ||||||||| | |||||||| | |||||||||| ||||||| || ||||| | Sbjct 49039 GCTCATCCCCTAATTTTTCAACATTAGTGGGTTCGATCCTCCAGTACGTGTTACCGCACC 48980 Query 268 TTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCC 327 ||||| ||| |||| |||||||||| | ||||||||| ||| | ||| || |||| Sbjct 48979 TTCAATCTGGCCATAAGTAGATCACTTGGTTTCGGGTCTATATCCAGAGACTAATTCGCC 48920 Query 328 CTATTCGGACTCGCTTTCGCTACGGCTACCCCA-CACGGGTTAACCTCGCGACACAACGC 386 || |||||||||| |||| || || || ||| | |||||| || || || || Sbjct 48919 CTGTTCGGACTCGATTTCTCTGCGCCTCCCCTATTTTCGGTTAAGCTTGCCACTGAA-TA 48861 Query 387 AAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCA 446 || |||| | | |||| | ||||||| |||| ||||| | | |||| || Sbjct 48860 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCAC--AGAA--TAAA-------TCT 48812 Query 447 GCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACT 506 ||||| || | ||||| |||||||||||||| |||||||||||||| || ||||| || Sbjct 48811 GCTCCTACTGTTTGTATGCACATGGTTTCAGAATCTATTTCACTCCCCTCCCGGGGTTCT 48752 Query 507 TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAA 566 ||||||||||||||||||||||| | | ||||||||| | |||||||||| || Sbjct 48751 TTTCACCTTTCCCTCACGGTACTAATTCACTATCGGTCGATTACGAGTATTTAGCTTTGG 48692 Query 567 CGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 || ||||||| || ||||| || | ||| || Sbjct 48691 AGGATGGTCCCCCCTTATTCAGACAAGATTACA 48659 >seq3357 Length=19165 Score = 122 bits (134), Expect = 3e-25 Identities = 305/455 (67%), Gaps = 29/455 (6%) Strand=Plus/Minus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 |||||| |||||||| ||||| ||||||||||||||| | || |||||| |||||| Sbjct 2413 GACGCT--ACCTAAATAGCTTTCGAGGAGAACCAGCTATCTCCGAGCTTGATTAGCCTTT 2356 Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253 |||||||||||||| ||||| ||| |||| | ||||||||||||| Sbjct 2355 CACCCCTATCCACAAATCATCTGAATCTTTTGCAACAGATACCAGTTCGGTCCTCCAGTA 2296 Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT-TGATCG 312 ||| |||||||||| |||||||||||| || | ||||||||| | || Sbjct 2295 ATGATTATATTACCTTCAACCTGTTCATGGATAGATCGCTCGGTTTCGGGTCTATTAT-T 2237 Query 313 TGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACC 372 | ||| || ||| || ||| ||| | |||| ||||| |||| | |||| | Sbjct 2236 TTTAACT-AT-CGCTCT-TTCAAACTTGATTTCTCTACGCCTAC----TAATAATTAAGC 2184 Query 373 TCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432 | || | | || || |||| | | |||| | ||||||| | || Sbjct 2183 TTGCTA-AAAATAATAAGTCGCTGACCCATTATACAAAAGGTA-------------TA-- 2140 Query 433 TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCC 492 | || ||||||| | | | || || | | || ||| |||| |||||||||||| Sbjct 2139 -TAGTTGCTTTTCAGCTTCTATTGCTTTTACGTATATAATTTTAGGTTCTATTTCACTCC 2081 Query 493 CCGCCAGGGGTACT-TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGG 551 | ||| || ||||| ||||||||||||||||| || | ||||||| | | | Sbjct 2080 TATAAAAAGGTTCTATTTCATCTTTCCCTCACGGTACTAGTTCACTATCGGATAACTATT 2021 Query 552 AGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586 ||||||||| |||| || ||||||| | | |||| Sbjct 2020 AGTATTTAGCCTTAGAGGATGGTCCCCCTATATTC 1986 Score = 122 bits (134), Expect = 3e-25 Identities = 305/455 (67%), Gaps = 29/455 (6%) Strand=Plus/Minus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 |||||| |||||||| ||||| ||||||||||||||| | || |||||| |||||| Sbjct 10076 GACGCT--ACCTAAATAGCTTTCGAGGAGAACCAGCTATCTCCGAGCTTGATTAGCCTTT 10019 Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253 |||||||||||||| ||||| ||| |||| | ||||||||||||| Sbjct 10018 CACCCCTATCCACAAATCATCTGAATCTTTTGCAACAGATACCAGTTCGGTCCTCCAGTA 9959 Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCT-TGATCG 312 ||| |||||||||| |||||||||||| || | ||||||||| | || Sbjct 9958 ATGATTATATTACCTTCAACCTGTTCATGGATAGATCGCTCGGTTTCGGGTCTATTAT-T 9900 Query 313 TGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACC 372 | ||| || ||| || ||| ||| | |||| ||||| |||| | |||| | Sbjct 9899 TTTAACT-AT-CGCTCT-TTCAAACTTGATTTCTCTACGCCTAC----TAATAATTAAGC 9847 Query 373 TCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432 | || | | || || |||| | | |||| | ||||||| | || Sbjct 9846 TTGCTA-AAAATAATAAGTCGCTGACCCATTATACAAAAGGTA-------------TA-- 9803 Query 433 TAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCC 492 | || ||||||| | | | || || | | || ||| |||| |||||||||||| Sbjct 9802 -TAGTTGCTTTTCAGCTTCTATTGCTTTTACGTATATAATTTTAGGTTCTATTTCACTCC 9744 Query 493 CCGCCAGGGGTACT-TTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGG 551 | ||| || ||||| ||||||||||||||||| || | ||||||| | | | Sbjct 9743 TATAAAAAGGTTCTATTTCATCTTTCCCTCACGGTACTAGTTCACTATCGGATAACTATT 9684 Query 552 AGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTC 586 ||||||||| |||| || ||||||| | | |||| Sbjct 9683 AGTATTTAGCCTTAGAGGATGGTCCCCCTATATTC 9649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1814655706112