Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22]
161,988 sequences; 485,705,082 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq1995 381 1e-103
seq3357 176 1e-41
seq16838 75.2 3e-11
>seq1995
Length=54681
Score = 381 bits (422), Expect = 1e-103
Identities = 342/412 (83%), Gaps = 14/412 (3%)
Strand=Plus/Minus
Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69
||||| |||| || |||| ||||||||| |||| |||||| ||||||||| || ||||
Sbjct 49043 CACAGCTCATCCC-CTAA-TTTTTCAACATTAGTGGGTTCGATCCTCCAGTACGT-GTTA 48987
Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCG 129
|| ||||| ||| ||| ||||| | |||||| | ||||| ||||||||| ||| || |
Sbjct 48986 CCGCACCTT-CAATCTGGCCATAAG-TAGATCACTTGGTTT-CGGGTCTATATCC-AGAG 48931
Query 130 ACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATT--CGGTTAAGCTT 186
|||| |||||| | |||||| ||| | || ||||||||||||| |||||||||||
Sbjct 48930 ACTAATTCGCCCTGTTCGGACTCGATTT-CTCTGCGCCTCCCCTATTTTCGGTTAAGCTT 48872
Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246
||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| |
Sbjct 48871 -GCCACTGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACAGAATAAA-T 48814
Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306
||||| |||| ||||| ||| | |||||||| |||||||||||||||||| |||||||
Sbjct 48813 CTGCTCCTACTGTTTGTATGCACATGGTTTCAGAATCTATTTCACTCCCCTC-CCGGGGT 48755
Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366
||||||| ||||||||||||||||||| ||||||||||||| | | |||||||||| |
Sbjct 48754 TCTTTTCACCTTTCCCTCACGGTACTAATTCACTATCGGTCGATTACGAGTATTTAGCTT 48695
Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
||||||||||||||||| ||||||||||| || | |||| |||| ||||
Sbjct 48694 TGGAGGATGGTCCCCCCTTATTCAGACAAGATTACACGTGTCTCGTCTTACT 48643
>seq3357
Length=19165
Score = 176 bits (194), Expect = 1e-41
Identities = 268/365 (73%), Gaps = 24/365 (7%)
Strand=Plus/Minus
Query 28 CTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGC 87
||||| |||| | | ||||||||||||||| | | ||| ||||| |||||||
Sbjct 2329 CTTTTGCAACAGATACCAGTTCGGTCCTCCAGTAATGA-TTATATTACCTT-CAACCTGT 2272
Query 88 CCATAGGATAGATCGCCCGGTTTTCGGGTCTATT--TCCCAGCGACTAGACGCCCTAGTA 145
||| ||||||||||| |||||| |||||||||| | | |||| ||| || |
Sbjct 2271 TCAT-GGATAGATCGCTCGGTTT-CGGGTCTATTATTTTTA---ACTAT-CGCTCTTTCA 2218
Query 146 AGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCG 205
| ||| | ||| | |||||||| | || | |||||||| || | | |||||||||
Sbjct 2217 A-ACTTGATTT-CTCTACGCCTAC--TAATAA-TTAAGCTT-GCTAAAAATAATAAGTCG 2164
Query 206 CTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTAC 265
|||||||||||||||||||||| ||| | || ||| | | ||||| |||
Sbjct 2163 CTGACCCATTATACAAAAGGTATATAGTTGCTTTTCA------GCTTCTATTGCTTTTAC 2110
Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT-TTTCGCCTTTCCCTC 324
| ||| ||| ||| ||||||||||||| | || |||| |||| |||||||||
Sbjct 2109 GTATATAATTTTAGGTTCTATTTCACTCCTATAAAAAGG-TTCTATTTCATCTTTCCCTC 2051
Query 325 ACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCA 384
||||||||||||||||||||| | | |||||||||||||| |||||||||||||| |
Sbjct 2050 ACGGTACTAGTTCACTATCGGATAACTATTAGTATTTAGCCTTAGAGGATGGTCCCCCTA 1991
Query 385 TATTC 389
|||||
Sbjct 1990 TATTC 1986
Score = 176 bits (194), Expect = 1e-41
Identities = 268/365 (73%), Gaps = 24/365 (7%)
Strand=Plus/Minus
Query 28 CTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGC 87
||||| |||| | | ||||||||||||||| | | ||| ||||| |||||||
Sbjct 9992 CTTTTGCAACAGATACCAGTTCGGTCCTCCAGTAATGA-TTATATTACCTT-CAACCTGT 9935
Query 88 CCATAGGATAGATCGCCCGGTTTTCGGGTCTATT--TCCCAGCGACTAGACGCCCTAGTA 145
||| ||||||||||| |||||| |||||||||| | | |||| ||| || |
Sbjct 9934 TCAT-GGATAGATCGCTCGGTTT-CGGGTCTATTATTTTTA---ACTAT-CGCTCTTTCA 9881
Query 146 AGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCG 205
| ||| | ||| | |||||||| | || | |||||||| || | | |||||||||
Sbjct 9880 A-ACTTGATTT-CTCTACGCCTAC--TAATAA-TTAAGCTT-GCTAAAAATAATAAGTCG 9827
Query 206 CTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTAC 265
|||||||||||||||||||||| ||| | || ||| | | ||||| |||
Sbjct 9826 CTGACCCATTATACAAAAGGTATATAGTTGCTTTTCA------GCTTCTATTGCTTTTAC 9773
Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT-TTTCGCCTTTCCCTC 324
| ||| ||| ||| ||||||||||||| | || |||| |||| |||||||||
Sbjct 9772 GTATATAATTTTAGGTTCTATTTCACTCCTATAAAAAGG-TTCTATTTCATCTTTCCCTC 9714
Query 325 ACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCA 384
||||||||||||||||||||| | | |||||||||||||| |||||||||||||| |
Sbjct 9713 ACGGTACTAGTTCACTATCGGATAACTATTAGTATTTAGCCTTAGAGGATGGTCCCCCTA 9654
Query 385 TATTC 389
|||||
Sbjct 9653 TATTC 9649
>seq16838
Length=1064
Score = 75.2 bits (82), Expect = 3e-11
Identities = 132/190 (69%), Gaps = 7/190 (4%)
Strand=Plus/Minus
Query 203 TCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC----AAAGTGGGCTCCCACTG 258
|||||||| |||||| |||||||||| | | |||| ||| | | ||| ||||
Sbjct 368 TCGCTGACTCATTATGCAAAAGGTACATCATTATCCAATTTTTAAATTAGACTCTGACTG 309
Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318
||| || ||| ||||||||||||||||| | || || ||||||| |||
Sbjct 308 CTTATAGATTAACGATTTCAGGATCTATTTCA--CAAGTCATCGACTGTCTTTTCATCTT 251
Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378
|| |||||| |||| |||||||| | | | | | ||||||||||| || |||| |
Sbjct 250 TCACTCACGTTACT-CTTCACTATTGATGATCTAATCATATTTAGCCTTAGAAGATGATT 192
Query 379 CCCCCATATT 388
| || ||||
Sbjct 191 ACTCCTTATT 182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1239588756992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |