Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1995 381 1e-103 seq3357 176 1e-41 seq16838 75.2 3e-11 >seq1995 Length=54681 Score = 381 bits (422), Expect = 1e-103 Identities = 342/412 (83%), Gaps = 14/412 (3%) Strand=Plus/Minus Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69 ||||| |||| || |||| ||||||||| |||| |||||| ||||||||| || |||| Sbjct 49043 CACAGCTCATCCC-CTAA-TTTTTCAACATTAGTGGGTTCGATCCTCCAGTACGT-GTTA 48987 Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCG 129 || ||||| ||| ||| ||||| | |||||| | ||||| ||||||||| ||| || | Sbjct 48986 CCGCACCTT-CAATCTGGCCATAAG-TAGATCACTTGGTTT-CGGGTCTATATCC-AGAG 48931 Query 130 ACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATT--CGGTTAAGCTT 186 |||| |||||| | |||||| ||| | || ||||||||||||| ||||||||||| Sbjct 48930 ACTAATTCGCCCTGTTCGGACTCGATTT-CTCTGCGCCTCCCCTATTTTCGGTTAAGCTT 48872 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| | Sbjct 48871 -GCCACTGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACAGAATAAA-T 48814 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||| |||| ||||| ||| | |||||||| |||||||||||||||||| ||||||| Sbjct 48813 CTGCTCCTACTGTTTGTATGCACATGGTTTCAGAATCTATTTCACTCCCCTC-CCGGGGT 48755 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| ||||||||||||||||||| ||||||||||||| | | |||||||||| | Sbjct 48754 TCTTTTCACCTTTCCCTCACGGTACTAATTCACTATCGGTCGATTACGAGTATTTAGCTT 48695 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||||||||||||||| ||||||||||| || | |||| |||| |||| Sbjct 48694 TGGAGGATGGTCCCCCCTTATTCAGACAAGATTACACGTGTCTCGTCTTACT 48643 >seq3357 Length=19165 Score = 176 bits (194), Expect = 1e-41 Identities = 268/365 (73%), Gaps = 24/365 (7%) Strand=Plus/Minus Query 28 CTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGC 87 ||||| |||| | | ||||||||||||||| | | ||| ||||| ||||||| Sbjct 2329 CTTTTGCAACAGATACCAGTTCGGTCCTCCAGTAATGA-TTATATTACCTT-CAACCTGT 2272 Query 88 CCATAGGATAGATCGCCCGGTTTTCGGGTCTATT--TCCCAGCGACTAGACGCCCTAGTA 145 ||| ||||||||||| |||||| |||||||||| | | |||| ||| || | Sbjct 2271 TCAT-GGATAGATCGCTCGGTTT-CGGGTCTATTATTTTTA---ACTAT-CGCTCTTTCA 2218 Query 146 AGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCG 205 | ||| | ||| | |||||||| | || | |||||||| || | | ||||||||| Sbjct 2217 A-ACTTGATTT-CTCTACGCCTAC--TAATAA-TTAAGCTT-GCTAAAAATAATAAGTCG 2164 Query 206 CTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTAC 265 |||||||||||||||||||||| ||| | || ||| | | ||||| ||| Sbjct 2163 CTGACCCATTATACAAAAGGTATATAGTTGCTTTTCA------GCTTCTATTGCTTTTAC 2110 Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT-TTTCGCCTTTCCCTC 324 | ||| ||| ||| ||||||||||||| | || |||| |||| ||||||||| Sbjct 2109 GTATATAATTTTAGGTTCTATTTCACTCCTATAAAAAGG-TTCTATTTCATCTTTCCCTC 2051 Query 325 ACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCA 384 ||||||||||||||||||||| | | |||||||||||||| |||||||||||||| | Sbjct 2050 ACGGTACTAGTTCACTATCGGATAACTATTAGTATTTAGCCTTAGAGGATGGTCCCCCTA 1991 Query 385 TATTC 389 ||||| Sbjct 1990 TATTC 1986 Score = 176 bits (194), Expect = 1e-41 Identities = 268/365 (73%), Gaps = 24/365 (7%) Strand=Plus/Minus Query 28 CTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGC 87 ||||| |||| | | ||||||||||||||| | | ||| ||||| ||||||| Sbjct 9992 CTTTTGCAACAGATACCAGTTCGGTCCTCCAGTAATGA-TTATATTACCTT-CAACCTGT 9935 Query 88 CCATAGGATAGATCGCCCGGTTTTCGGGTCTATT--TCCCAGCGACTAGACGCCCTAGTA 145 ||| ||||||||||| |||||| |||||||||| | | |||| ||| || | Sbjct 9934 TCAT-GGATAGATCGCTCGGTTT-CGGGTCTATTATTTTTA---ACTAT-CGCTCTTTCA 9881 Query 146 AGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCG 205 | ||| | ||| | |||||||| | || | |||||||| || | | ||||||||| Sbjct 9880 A-ACTTGATTT-CTCTACGCCTAC--TAATAA-TTAAGCTT-GCTAAAAATAATAAGTCG 9827 Query 206 CTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTAC 265 |||||||||||||||||||||| ||| | || ||| | | ||||| ||| Sbjct 9826 CTGACCCATTATACAAAAGGTATATAGTTGCTTTTCA------GCTTCTATTGCTTTTAC 9773 Query 266 GCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT-TTTCGCCTTTCCCTC 324 | ||| ||| ||| ||||||||||||| | || |||| |||| ||||||||| Sbjct 9772 GTATATAATTTTAGGTTCTATTTCACTCCTATAAAAAGG-TTCTATTTCATCTTTCCCTC 9714 Query 325 ACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCA 384 ||||||||||||||||||||| | | |||||||||||||| |||||||||||||| | Sbjct 9713 ACGGTACTAGTTCACTATCGGATAACTATTAGTATTTAGCCTTAGAGGATGGTCCCCCTA 9654 Query 385 TATTC 389 ||||| Sbjct 9653 TATTC 9649 >seq16838 Length=1064 Score = 75.2 bits (82), Expect = 3e-11 Identities = 132/190 (69%), Gaps = 7/190 (4%) Strand=Plus/Minus Query 203 TCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC----AAAGTGGGCTCCCACTG 258 |||||||| |||||| |||||||||| | | |||| ||| | | ||| |||| Sbjct 368 TCGCTGACTCATTATGCAAAAGGTACATCATTATCCAATTTTTAAATTAGACTCTGACTG 309 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 ||| || ||| ||||||||||||||||| | || || ||||||| ||| Sbjct 308 CTTATAGATTAACGATTTCAGGATCTATTTCA--CAAGTCATCGACTGTCTTTTCATCTT 251 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 || |||||| |||| |||||||| | | | | | ||||||||||| || |||| | Sbjct 250 TCACTCACGTTACT-CTTCACTATTGATGATCTAATCATATTTAGCCTTAGAAGATGATT 192 Query 379 CCCCCATATT 388 | || |||| Sbjct 191 ACTCCTTATT 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1239588756992