Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq4043 104 1e-20 seq1517 91.5 9e-17 >seq4043 Length=12931 Score = 104 bits (114), Expect = 1e-20 Identities = 95/112 (85%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| || | | || | | |||||| | | ||||||||||||| || |||||| Sbjct 8474 CCGTT-GCCGGCTCAA-ATAGACCACTCCGAAGGAT-TCACTAAGCCATT-CAATCGGTA 8419 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| |||||||||| ||||||||||||| ||||||||||| Sbjct 8418 GTA-GCGACGGGCGGTGTGTACAAAGAGCAGGGACGTAAT-CAACGCAAGCT 8369 >seq1517 Length=79253 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 9789 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 9845 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 9846 GGCAGGGACGTAAT-CAACGCGAGCT 9870 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 16709 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 16765 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 16766 GGCAGGGACGTAAT-CAACGCGAGCT 16790 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 25757 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 25813 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 25814 GGCAGGGACGTAAT-CAACGCGAGCT 25838 Score = 91.5 bits (100), Expect = 9e-17 Identities = 75/86 (87%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 51371 TCCGAA-GACCTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 51427 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||||| |||| Sbjct 51428 GGCAGGGACGTAAT-CAACGCGAGCT 51452 Score = 73.4 bits (80), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| || |||| || |||||||| ||||||||||| |||||||||| Sbjct 71747 TCCGAA-GACCTCACCAAATCATTCGAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAAG 71803 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| || ||| |||| Sbjct 71804 GACAGGGACGTAAT-CAGCGCGAGCT 71828 Score = 73.4 bits (80), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | ||||| || |||| || |||||||| ||||||||||| |||||||||| Sbjct 75464 TCCGAA-GACCTCACCAAATCATTCGAT-CGGTAGTA-GCGACGGGCGGTGTGTACAAAG 75520 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 | |||||||||||| || ||| |||| Sbjct 75521 GACAGGGACGTAAT-CAGCGCGAGCT 75545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300343193840