Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq1995 140 5e-31 seq3357 109 9e-22 >seq1995 Length=54681 Score = 140 bits (154), Expect = 5e-31 Identities = 217/299 (73%), Gaps = 12/299 (4%) Strand=Plus/Minus Query 3 CACGCTTTCGC-GCCTCAGCGTCAGTTACTGTCCAGCAATCC-GCCTTCGCCACTGGTGT 60 |||||||||| || | ||||||||| |||| | | || ||||||| ||| | Sbjct 47352 CACGCTTTCGTAGCATGAGCGTCAGTGTTATCCCAGGAGACTTGCTTTCGCCATCGGTAT 47293 Query 61 TCCTCCGTATATCTA--CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC 118 |||||| ||||||| |||||||||| |||||| ||||||| | ||||| | Sbjct 47292 TCCTCCACATATCTATACGCATTTCACTGCTACATGTGGAATTCTATCTCCCTCTGACAC 47233 Query 119 ACTCAAGAAAAAC---AGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGT-TTTCACAT 174 |||| || | ||| |||||||| ||||||||||| | |||||||| Sbjct 47232 ACTCTAGCTTTGCTGCAGTCACAAATGCAATTCCAAGGTTGAGCCCAGGGCATTTCACAT 47173 Query 175 CTGACTTGCCTTC-CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCC 233 ||| ||| | |||||||| | |||||| |||| ||| |||| ||||||| || Sbjct 47172 CTGTCTTACAAAAACCGCCTACGTACGCTTTACGCCCA-TAATTCCGATTAACGCTCGCA 47114 Query 234 ACCTACG-TATTACCGCGG-CTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||| Sbjct 47113 CCCTACGGTATTACCGCGGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCAGGTA 47055 >seq3357 Length=19165 Score = 109 bits (120), Expect = 9e-22 Identities = 196/282 (70%), Gaps = 12/282 (4%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGT--TACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCC 63 ||||||| | |||| |||||| || | || || ||||||||||||| || |||| Sbjct 823 GCTTTCGTGTATCAGTGTCAGTATTAAAAT--AGAAAAACGCCTTCGCCACTAGTATTCC 766 Query 64 TCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCA 123 | | ||||||| ||||||||| ||||| | | ||||| ||| | ||| ||||| Sbjct 765 TTCAGATATCTAAGCATTTCACTGCTACTCCTGAAATTCTAATTTCTTCTTTTATACTCA 706 Query 124 AGAAAAACAGTTTCAAATGCAGGCT---ATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || | ||| | || ||| | || | || | ||| ||| ||| | ||| Sbjct 705 AGTTTATTAGTATTAATTGCTTTATTAAATTGCTTTA----ATAACTTTTACAATTAACT 650 Query 181 TGCCTTCCCG-CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 | | | ||||||| |||||||| |||| ||| | | |||||||||| || | Sbjct 649 TTCAAAAACAACCTACACACCCTTTACGCCCAGTAATTTTGATTAACGCTTGCACCCCTC 590 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATT 281 ||||||||||||||||||||||| ||||||||| |||| || Sbjct 589 GTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGTGCTTCTT 548 Score = 109 bits (120), Expect = 9e-22 Identities = 196/282 (70%), Gaps = 12/282 (4%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGT--TACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCC 63 ||||||| | |||| |||||| || | || || ||||||||||||| || |||| Sbjct 8486 GCTTTCGTGTATCAGTGTCAGTATTAAAAT--AGAAAAACGCCTTCGCCACTAGTATTCC 8429 Query 64 TCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCA 123 | | ||||||| ||||||||| ||||| | | ||||| ||| | ||| ||||| Sbjct 8428 TTCAGATATCTAAGCATTTCACTGCTACTCCTGAAATTCTAATTTCTTCTTTTATACTCA 8369 Query 124 AGAAAAACAGTTTCAAATGCAGGCT---ATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || | ||| | || ||| | || | || | ||| ||| ||| | ||| Sbjct 8368 AGTTTATTAGTATTAATTGCTTTATTAAATTGCTTTA----ATAACTTTTACAATTAACT 8313 Query 181 TGCCTTCCCG-CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 | | | ||||||| |||||||| |||| ||| | | |||||||||| || | Sbjct 8312 TTCAAAAACAACCTACACACCCTTTACGCCCAGTAATTTTGATTAACGCTTGCACCCCTC 8253 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATT 281 ||||||||||||||||||||||| ||||||||| |||| || Sbjct 8252 GTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGTGCTTCTT 8211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827499398348