Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22]
161,988 sequences; 485,705,082 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq1995 140 5e-31
seq3357 109 9e-22
>seq1995
Length=54681
Score = 140 bits (154), Expect = 5e-31
Identities = 217/299 (73%), Gaps = 12/299 (4%)
Strand=Plus/Minus
Query 3 CACGCTTTCGC-GCCTCAGCGTCAGTTACTGTCCAGCAATCC-GCCTTCGCCACTGGTGT 60
|||||||||| || | ||||||||| |||| | | || ||||||| ||| |
Sbjct 47352 CACGCTTTCGTAGCATGAGCGTCAGTGTTATCCCAGGAGACTTGCTTTCGCCATCGGTAT 47293
Query 61 TCCTCCGTATATCTA--CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC 118
|||||| ||||||| |||||||||| |||||| ||||||| | ||||| |
Sbjct 47292 TCCTCCACATATCTATACGCATTTCACTGCTACATGTGGAATTCTATCTCCCTCTGACAC 47233
Query 119 ACTCAAGAAAAAC---AGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGT-TTTCACAT 174
|||| || | ||| |||||||| ||||||||||| | ||||||||
Sbjct 47232 ACTCTAGCTTTGCTGCAGTCACAAATGCAATTCCAAGGTTGAGCCCAGGGCATTTCACAT 47173
Query 175 CTGACTTGCCTTC-CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCC 233
||| ||| | |||||||| | |||||| |||| ||| |||| ||||||| ||
Sbjct 47172 CTGTCTTACAAAAACCGCCTACGTACGCTTTACGCCCA-TAATTCCGATTAACGCTCGCA 47114
Query 234 ACCTACG-TATTACCGCGG-CTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||
Sbjct 47113 CCCTACGGTATTACCGCGGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTCAGGTA 47055
>seq3357
Length=19165
Score = 109 bits (120), Expect = 9e-22
Identities = 196/282 (70%), Gaps = 12/282 (4%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGT--TACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCC 63
||||||| | |||| |||||| || | || || ||||||||||||| || ||||
Sbjct 823 GCTTTCGTGTATCAGTGTCAGTATTAAAAT--AGAAAAACGCCTTCGCCACTAGTATTCC 766
Query 64 TCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCA 123
| | ||||||| ||||||||| ||||| | | ||||| ||| | ||| |||||
Sbjct 765 TTCAGATATCTAAGCATTTCACTGCTACTCCTGAAATTCTAATTTCTTCTTTTATACTCA 706
Query 124 AGAAAAACAGTTTCAAATGCAGGCT---ATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| | ||| | || ||| | || | || | ||| ||| ||| | |||
Sbjct 705 AGTTTATTAGTATTAATTGCTTTATTAAATTGCTTTA----ATAACTTTTACAATTAACT 650
Query 181 TGCCTTCCCG-CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239
| | | ||||||| |||||||| |||| ||| | | |||||||||| || |
Sbjct 649 TTCAAAAACAACCTACACACCCTTTACGCCCAGTAATTTTGATTAACGCTTGCACCCCTC 590
Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATT 281
||||||||||||||||||||||| ||||||||| |||| ||
Sbjct 589 GTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGTGCTTCTT 548
Score = 109 bits (120), Expect = 9e-22
Identities = 196/282 (70%), Gaps = 12/282 (4%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGT--TACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCC 63
||||||| | |||| |||||| || | || || ||||||||||||| || ||||
Sbjct 8486 GCTTTCGTGTATCAGTGTCAGTATTAAAAT--AGAAAAACGCCTTCGCCACTAGTATTCC 8429
Query 64 TCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCA 123
| | ||||||| ||||||||| ||||| | | ||||| ||| | ||| |||||
Sbjct 8428 TTCAGATATCTAAGCATTTCACTGCTACTCCTGAAATTCTAATTTCTTCTTTTATACTCA 8369
Query 124 AGAAAAACAGTTTCAAATGCAGGCT---ATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| | ||| | || ||| | || | || | ||| ||| ||| | |||
Sbjct 8368 AGTTTATTAGTATTAATTGCTTTATTAAATTGCTTTA----ATAACTTTTACAATTAACT 8313
Query 181 TGCCTTCCCG-CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239
| | | ||||||| |||||||| |||| ||| | | |||||||||| || |
Sbjct 8312 TTCAAAAACAACCTACACACCCTTTACGCCCAGTAATTTTGATTAACGCTTGCACCCCTC 8253
Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATT 281
||||||||||||||||||||||| ||||||||| |||| ||
Sbjct 8252 GTATTACCGCGGCTGCTGGCACGAAGTTAGCCGGTGCTTCTT 8211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 827499398348
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |