Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq1995 156 4e-36 seq3357 75.2 1e-11 >seq1995 Length=54681 Score = 156 bits (172), Expect = 4e-36 Identities = 128/156 (82%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||| |||||||||| |||||| | |||||||||||| ||| |||||| | ||| Sbjct 50679 GTTGAGCGATAGCCCTTCCATACAGAACTATCGGATCACTATGTCCTACTTTCGTATCTG 50620 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| |||| ||||||||| |||| |||||||||||||||||| ||||| || Sbjct 50619 CTCGACTTGTCAGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATTAGTACGATTTC 50560 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||||| ||||| | ||||||||||| Sbjct 50559 CGACCGTACTTAGCGTACCTTAGAACTCCTCCGTTA 50524 >seq3357 Length=19165 Score = 75.2 bits (82), Expect = 1e-11 Identities = 110/156 (71%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||| || |||||| ||||| | |||||||||| |||| |||||| | ||| Sbjct 3957 GTTGAGCGATAACCTTTCCATACAGAATTATCGGATCACTAGAACCTACTTTCGTATCTG 3898 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 | || ||| ||| |||| |||| | ||||| || || | | ||||| || Sbjct 3897 TTTGATATGTCTATCTTACAGTTAAGCACCCATATGCTCTTATGCTCAACATACGATTTC 3838 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | | ||| | || ||||| || ||||||||||| Sbjct 3837 CAAACGTATTGAGGGTACCTTTGTACTCCTCCGTTA 3802 Score = 75.2 bits (82), Expect = 1e-11 Identities = 110/156 (71%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||| || |||||| ||||| | |||||||||| |||| |||||| | ||| Sbjct 11620 GTTGAGCGATAACCTTTCCATACAGAATTATCGGATCACTAGAACCTACTTTCGTATCTG 11561 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 | || ||| ||| |||| |||| | ||||| || || | | ||||| || Sbjct 11560 TTTGATATGTCTATCTTACAGTTAAGCACCCATATGCTCTTATGCTCAACATACGATTTC 11501 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | | ||| | || ||||| || ||||||||||| Sbjct 11500 CAAACGTATTGAGGGTACCTTTGTACTCCTCCGTTA 11465 Score = 75.2 bits (82), Expect = 1e-11 Identities = 110/156 (71%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||| || |||||| ||||| | |||||||||| |||| |||||| | ||| Sbjct 18742 GTTGAGCGATAACCTTTCCATACAGAATTATCGGATCACTAGAACCTACTTTCGTATCTG 18683 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 | || ||| ||| |||| |||| | ||||| || || | | ||||| || Sbjct 18682 TTTGATATGTCTATCTTACAGTTAAGCACCCATATGCTCTTATGCTCAACATACGATTTC 18623 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | | ||| | || ||||| || ||||||||||| Sbjct 18622 CAAACGTATTGAGGGTACCTTTGTACTCCTCCGTTA 18587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472856799056