Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22]
161,988 sequences; 485,705,082 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq1995 288 2e-75
seq3357 221 2e-55
>seq1995
Length=54681
Score = 288 bits (318), Expect = 2e-75
Identities = 224/267 (84%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 9 GCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68
||||| |||||||||| |||||| ||||| ||||| ||||||||| | | |||||||
Sbjct 51019 GCTTCCCGCTTAGATGCTTTCAGCGGTTATCTCTTCCGAACTTAGCTACTCGGCTATGCC 50960
Query 69 CTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC 128
|||| ||||| | ||||||||||||| ||||| ||||||||||||||||| | |
Sbjct 50959 ACTGGCGTGACAACCGATGCACCAGAGGTTCGTCCACTCCGGTCCTCTCGTACTAGGAGC 50900
Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188
||||||| |||||||||| |||||||| | |||||||||| ||||||||| |||||||
Sbjct 50899 AGCTCCTTTCAAATTTCCATCGCCCACGGCAGATAGGGACCAAACTGTCTCACGACGTTT 50840
Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248
| |||||||||| ||| || |||||| ||||||||||| |||||||||||||||| ||
Sbjct 50839 TAAACCCAGCTCACGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTACA 50780
Query 249 GCCCCAGGATGAGACGAGCCGACATCG 275
||||||||||| || ||||||||||||
Sbjct 50779 GCCCCAGGATGTGATGAGCCGACATCG 50753
>seq3357
Length=19165
Score = 221 bits (244), Expect = 2e-55
Identities = 210/267 (79%), Gaps = 1/267 (0%)
Strand=Plus/Minus
Query 9 GCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68
||||| |||| |||| ||||| ||||| || |||||||| | || |||||||
Sbjct 4296 GCTTCCTACTTATATGCTTTCAGTAGTTATCATTTT-AAACTTAGTTAACCGGCTATGCC 4238
Query 69 CTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC 128
|||||| ||||| || ||||| ||||| || || |||||||||||||||| |||
Sbjct 4237 ATTGGCATGACAACCGGACCACCATTGGTTTAACCGTCTTGGTCCTCTCGTACTAAAGAC 4178
Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188
|| | || ||||| | |||| | ||| |||||||||||||||||||| ||||||||
Sbjct 4177 AGATTCTTTCAAAATCTCTACATCTACGGTAGATAGGGACCGAACTGTCTCACGACGTTC 4118
Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248
| |||||||||||||| || |||||| ||||||||||| |||||||| ||| ||| ||
Sbjct 4117 TAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGAACCAACTCCA 4058
Query 249 GCCCCAGGATGAGACGAGCCGACATCG 275
|| |||||||| || ||||||||||||
Sbjct 4057 GCTCCAGGATGTGATGAGCCGACATCG 4031
Score = 221 bits (244), Expect = 2e-55
Identities = 210/267 (79%), Gaps = 1/267 (0%)
Strand=Plus/Minus
Query 9 GCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68
||||| |||| |||| ||||| ||||| || |||||||| | || |||||||
Sbjct 11959 GCTTCCTACTTATATGCTTTCAGTAGTTATCATTTT-AAACTTAGTTAACCGGCTATGCC 11901
Query 69 CTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC 128
|||||| ||||| || ||||| ||||| || || |||||||||||||||| |||
Sbjct 11900 ATTGGCATGACAACCGGACCACCATTGGTTTAACCGTCTTGGTCCTCTCGTACTAAAGAC 11841
Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188
|| | || ||||| | |||| | ||| |||||||||||||||||||| ||||||||
Sbjct 11840 AGATTCTTTCAAAATCTCTACATCTACGGTAGATAGGGACCGAACTGTCTCACGACGTTC 11781
Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248
| |||||||||||||| || |||||| ||||||||||| |||||||| ||| ||| ||
Sbjct 11780 TAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGAACCAACTCCA 11721
Query 249 GCCCCAGGATGAGACGAGCCGACATCG 275
|| |||||||| || ||||||||||||
Sbjct 11720 GCTCCAGGATGTGATGAGCCGACATCG 11694
Score = 221 bits (244), Expect = 2e-55
Identities = 210/267 (79%), Gaps = 1/267 (0%)
Strand=Plus/Minus
Query 9 GCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCA 68
||||| |||| |||| ||||| ||||| || |||||||| | || |||||||
Sbjct 19081 GCTTCCTACTTATATGCTTTCAGTAGTTATCATTTT-AAACTTAGTTAACCGGCTATGCC 19023
Query 69 CTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC 128
|||||| ||||| || ||||| ||||| || || |||||||||||||||| |||
Sbjct 19022 ATTGGCATGACAACCGGACCACCATTGGTTTAACCGTCTTGGTCCTCTCGTACTAAAGAC 18963
Query 129 AGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTC 188
|| | || ||||| | |||| | ||| |||||||||||||||||||| ||||||||
Sbjct 18962 AGATTCTTTCAAAATCTCTACATCTACGGTAGATAGGGACCGAACTGTCTCACGACGTTC 18903
Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248
| |||||||||||||| || |||||| ||||||||||| |||||||| ||| ||| ||
Sbjct 18902 TAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGAACCAACTCCA 18843
Query 249 GCCCCAGGATGAGACGAGCCGACATCG 275
|| |||||||| || ||||||||||||
Sbjct 18842 GCTCCAGGATGTGATGAGCCGACATCG 18816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 779574722768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |