Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq1995 286 8e-75 seq3357 172 1e-40 >seq1995 Length=54681 Score = 286 bits (316), Expect = 8e-75 Identities = 325/428 (76%), Gaps = 26/428 (6%) Strand=Plus/Minus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCG--GCATGGCTGCATCAGGCTTGCGCCC 61 ||||||||||| ||||||||||||| |||||| |||| |||| ||||||||| ||||| Sbjct 47001 CTTTACAACCCTAAGGCCTTCTTCACTCACGCGCGGCATTGCTGGATCAGGCTTTCGCCC 46942 Query 62 ATTGTGC-AATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 ||||| | || |||||||||||||||||||||||||||||||| | |||||||||| ||| Sbjct 46941 ATTGTTCCAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGC-GTGTCTCAGTCCCA 46883 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGC-CATTACCC 179 ||||||||| |||||||||||||||||||| ||||| | || ||| ||| |||||| Sbjct 46882 GTGTGGCTGATCATCCTCTCAGACCAGCTACTGATCGCGGTCTTGGTAGGCTTTTTACCC 46823 Query 180 CGCCAACTAGCTAATCCCATCTGGGTTCATCCGATAG-----------TGAGAGGCCCGA 228 | ||||||| |||||| || | || ||| | || | | | | | Sbjct 46822 CACCAACTAACTAATCAGATATCGGCCGCTCCAAAAGCATAAGGTTTTTAAAAATACTAA 46763 Query 229 AGGTCCCCCTCTTTGGTCTTGCGACGT-TATGCGGTATTAGC-CACCGTTTCCAGTGGTT 286 | ||||| ||| || | || | |||||||||||||| | |||| | | ||| Sbjct 46762 AAATCCCCTATTTTCATCGTTAGATTTGTATGCGGTATTAGCTAATTTTTTCAACTAGTT 46703 Query 287 ATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAA 346 ||||||| | || | |||| | | ||||||||||||| |||||||||||||| | Sbjct 46702 ATCCCCCACTTAAGGGTACGTTCCGATATATTACTCACCCGTTCGCCACTCGTCAGC--A 46645 Query 347 GCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTC 406 | | || || ||||||||||||||||||||||||| | || |||||||||||||| Sbjct 46644 G-ATAAATCT-----CTGTTACCGTTCGACTTGCATGTGTAAAGCATGCCGCCAGCGTTC 46591 Query 407 AATCTGAG 414 |||||||| Sbjct 46590 AATCTGAG 46583 >seq3357 Length=19165 Score = 172 bits (190), Expect = 1e-40 Identities = 155/195 (79%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||||| ||||||| ||| |||| |||| ||| ||| |||| Sbjct 482 TTTACAACCCTAAGGCCTTCTTCACACACGCGACATAGCTGGATCAAGCTCTCGCTCATT 423 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 || ||||||||||||||||||||| || || ||| ||| |||||||||||| ||| ||| Sbjct 422 GTCCAATATTCCCCACTGCTGCCTTCCTTAAAAGTTTGGGCCGTGTCTCAGTCCCAATGT 363 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 || || ||||||||| |||||| ||| ||||| | | || | | | |||| || Sbjct 362 GGTTGTTCATCCTCTAAGACCAACTACGGATCATAGTCTTGTTAAACATTTACTTTAACA 303 Query 185 ACTAGCTAATCCCAT 199 |||| ||||||| || Sbjct 302 ACTAACTAATCCGAT 288 Score = 172 bits (190), Expect = 1e-40 Identities = 155/195 (79%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||| ||||||||||||| ||||||| ||| |||| |||| ||| ||| |||| Sbjct 8145 TTTACAACCCTAAGGCCTTCTTCACACACGCGACATAGCTGGATCAAGCTCTCGCTCATT 8086 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 || ||||||||||||||||||||| || || ||| ||| |||||||||||| ||| ||| Sbjct 8085 GTCCAATATTCCCCACTGCTGCCTTCCTTAAAAGTTTGGGCCGTGTCTCAGTCCCAATGT 8026 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 || || ||||||||| |||||| ||| ||||| | | || | | | |||| || Sbjct 8025 GGTTGTTCATCCTCTAAGACCAACTACGGATCATAGTCTTGTTAAACATTTACTTTAACA 7966 Query 185 ACTAGCTAATCCCAT 199 |||| ||||||| || Sbjct 7965 ACTAACTAATCCGAT 7951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1220419858688