Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1995 282 1e-73 seq3357 228 2e-57 seq6873 75.2 3e-11 >seq1995 Length=54681 Score = 282 bits (312), Expect = 1e-73 Identities = 281/361 (78%), Gaps = 35/361 (10%) Strand=Plus/Plus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACG-GCTTACCAAGGCGACGATCAGTAGCCGACCTG 222 ||||||||| |||||||| ||||| || ||||||| | ||||||||||| | ||| Sbjct 46804 TCTGATTAGTTAGTTGGTGGGGTAAAAAGCCTACCAAGACCGCGATCAGTAGCTGGTCTG 46863 Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 ||||| ||||| |||||| ||| |||||||||| | ||| |||||||||||||||||||| Sbjct 46864 AGAGGATGATCAGCCACACTGGGACTGAGACAC-GCCCAGACTCCTACGGGAGGCAGCAG 46922 Query 283 TGGGGAATATT-GCACAATGGGCAAAAGCCTGATGCAGCAACGC--CGCGTGAGCGATGA 339 |||||||| || | ||||||||| |||||||||| |||||| || |||||||| || || Sbjct 46923 TGGGGAATTTTGGAACAATGGGCGAAAGCCTGATCCAGCAATGCCGCGCGTGAGTGAAGA 46982 Query 340 AGGCCTTCGGGTCGTAAAGCTC-TGTCCTCAAGGAAGA---------------------- 376 ||||||| |||| ||||||||| | | ||| | |||| Sbjct 46983 AGGCCTTAGGGTTGTAAAGCTCTTTTAATCAGGAAAGAAACGAATTAATATAATACATTA 47042 Query 377 ---TAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAG-CCGCGGTA 432 |||||||||||| ||| || |||| |||||||||||||||||||||| |||||||| Sbjct 47043 ATTTAATGACGGTACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCCGCGGTA 47102 Query 433 ATA-CGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTT 491 ||| ||||||| || ||||||| |||||||| |||||||||| || |||||| |||| Sbjct 47103 ATACCGTAGGGTGCGAGCGTTAATCGGAATTA--TGGGCGTAAAGCGTACGTAGGCGGTT 47160 Query 492 T 492 | Sbjct 47161 T 47161 >seq3357 Length=19165 Score = 228 bits (252), Expect = 2e-57 Identities = 263/357 (74%), Gaps = 29/357 (8%) Strand=Plus/Plus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 || |||||| |||||| ||| |||| | ||| |||| | | |||| |||| | || | Sbjct 289 TCGGATTAGTTAGTTGTTAAAGTAAATGTTTAACAAGACTATGATCCGTAGTTGGTCTTA 348 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 |||| ||| | ||||||||| |||||||||||| ||||||| || || |||||||||| Sbjct 349 GAGGATGAACAACCACATTGGGACTGAGACACGGCCCAAACTTTTAAGGAAGGCAGCAGT 408 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 ||||||||||| |||||| || | ||| |||| |||| | | |||||| | || |||||| Sbjct 409 GGGGAATATTGGACAATGAGCGAGAGCTTGATCCAGCTATGTCGCGTGTGTGAAGAAGGC 468 Query 344 CTTCGGGTCGTAAAGCTCTGTCCTC-AAGGAAGA-------------TAA---------- 379 ||| |||| ||||| | || || | ||| |||| ||| Sbjct 469 CTTAGGGTTGTAAAACACTTTCAACAAAGCAAGAAGAAAGAGTATTTTAATAAAATATTT 528 Query 380 ----TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATA 435 ||||| || ||| | ||||| |||||||||| |||||||||||||||||||||| Sbjct 529 TTTTTGACGATATTTGTAAAAGAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATA 588 Query 436 CGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 || ||| || ||||||| | ||||||| |||||||||||||| |||||| |||| Sbjct 589 CGAGGGGTGCAAGCGTTAATCAAAATTACT-GGGCGTAAAGGGTGTGTAGGTTGTTT 644 Score = 228 bits (252), Expect = 2e-57 Identities = 263/357 (74%), Gaps = 29/357 (8%) Strand=Plus/Plus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 || |||||| |||||| ||| |||| | ||| |||| | | |||| |||| | || | Sbjct 7952 TCGGATTAGTTAGTTGTTAAAGTAAATGTTTAACAAGACTATGATCCGTAGTTGGTCTTA 8011 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 |||| ||| | ||||||||| |||||||||||| ||||||| || || |||||||||| Sbjct 8012 GAGGATGAACAACCACATTGGGACTGAGACACGGCCCAAACTTTTAAGGAAGGCAGCAGT 8071 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 ||||||||||| |||||| || | ||| |||| |||| | | |||||| | || |||||| Sbjct 8072 GGGGAATATTGGACAATGAGCGAGAGCTTGATCCAGCTATGTCGCGTGTGTGAAGAAGGC 8131 Query 344 CTTCGGGTCGTAAAGCTCTGTCCTC-AAGGAAGA-------------TAA---------- 379 ||| |||| ||||| | || || | ||| |||| ||| Sbjct 8132 CTTAGGGTTGTAAAACACTTTCAACAAAGCAAGAAGAAAGAGTATTTTAATAAAATATTT 8191 Query 380 ----TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATA 435 ||||| || ||| | ||||| |||||||||| |||||||||||||||||||||| Sbjct 8192 TTTTTGACGATATTTGTAAAAGAAGCACCGGCTAACTTCGTGCCAGCAGCCGCGGTAATA 8251 Query 436 CGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 || ||| || ||||||| | ||||||| |||||||||||||| |||||| |||| Sbjct 8252 CGAGGGGTGCAAGCGTTAATCAAAATTACT-GGGCGTAAAGGGTGTGTAGGTTGTTT 8307 >seq6873 Length=4015 Score = 75.2 bits (82), Expect = 3e-11 Identities = 65/81 (80%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 ||| | ||||||||||||| |||||| |||||||||||||| ||| ||||| | |||| Sbjct 2864 TCTAAGTAGCTAGTTGGTAGGGTAACTGCTTACCAAGGCGATGATTAGTAGTCAGTCTGA 2923 Query 224 GAGGGTGATCGGCCACATTGG 244 ||| || ||||||| ||| Sbjct 2924 AAGGATGTATGGCCACAGTGG 2944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1495174067712