Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22]
161,988 sequences; 485,705,082 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq4043 351 2e-94
seq1517 230 4e-58
seq122 87.8 3e-15
>seq4043
Length=12931
Score = 351 bits (388), Expect = 2e-94
Identities = 270/314 (86%), Gaps = 6/314 (2%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGCCGGCTTCTTA 78
|| ||||||||||||||||||||||||| | | | ||| | | | |||||||||
Sbjct 8088 GAACGAGACCTTAACCTGCTAAATAGCCGGTACGACATTTTGTTGTACATTGGCTTCTTA 8147
Query 79 GAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136
|||||||||| | | | || | ||||||||||||||||||||||||||||||||||||
Sbjct 8148 GAGGGACTATTGATGTTTAATCA-ATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 8206
Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCA-CCTT 194
||||||||||||||||||||||||||||||||||||||| || ||||| | || ||||
Sbjct 8207 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGGCAGCGAGTATTATATTCCTT 8266
Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254
|| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8267 ATTCGAAAGAATTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 8326
Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314
||||||||||||||||||||| | |||||||||| ||||||||| |||||||||||||
Sbjct 8327 TATTGCTCTTCAACGAGGAATTCTTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGT 8386
Query 315 CCCTGCCCTTTGTA 328
|||||| |||||||
Sbjct 8387 CCCTGCTCTTTGTA 8400
>seq1517
Length=79253
Score = 230 bits (254), Expect = 4e-58
Identities = 208/258 (81%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| |||| || ||||| || | ||||| ||||||||||||||||
Sbjct 10094 CTTCTTAGAGGGACAGACGGCGTCTAGCCGTACGA-GATTGAG-CAATAACAGGTCTGTG 10037
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||||||||||||||||||||||||||||| || || || || | ||
Sbjct 10036 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGCGTCCTACA 9977
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || ||| ||||| | ||||| | | |||
Sbjct 9976 CCTGGGCCGAGAGGCTCGGGTAACCCACTGAACCTCCTTCGTGATAGGGATCGGGGCTTG 9917
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 9916 CAATTTTTCCCCGTGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 9857
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 9856 ACGTCCCTGCCCTTTGTA 9839
Score = 230 bits (254), Expect = 4e-58
Identities = 208/258 (81%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| |||| || ||||| || | ||||| ||||||||||||||||
Sbjct 17014 CTTCTTAGAGGGACAGACGGCGTCTAGCCGTACGA-GATTGAG-CAATAACAGGTCTGTG 16957
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||||||||||||||||||||||||||||| || || || || | ||
Sbjct 16956 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGCGTCCTACA 16897
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || ||| ||||| | ||||| | | |||
Sbjct 16896 CCTGGGCCGAGAGGCTCGGGTAACCCACTGAACCTCCTTCGTGATAGGGATCGGGGCTTG 16837
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 16836 CAATTTTTCCCCGTGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 16777
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 16776 ACGTCCCTGCCCTTTGTA 16759
Score = 230 bits (254), Expect = 4e-58
Identities = 208/258 (81%), Gaps = 3/258 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| |||| || ||||| || | ||||| ||||||||||||||||
Sbjct 51676 CTTCTTAGAGGGACAGACGGCGTCTAGCCGTACGA-GATTGAG-CAATAACAGGTCTGTG 51619
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||||||||||||||||||||||||||||| || || || || | ||
Sbjct 51618 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGCGTCCTACA 51559
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || ||| ||||| | ||||| | | |||
Sbjct 51558 CCTGGGCCGAGAGGCTCGGGTAACCCACTGAACCTCCTTCGTGATAGGGATCGGGGCTTG 51499
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 51498 CAATTTTTCCCCGTGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 51439
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 51438 ACGTCCCTGCCCTTTGTA 51421
Score = 214 bits (236), Expect = 3e-53
Identities = 182/223 (82%), Gaps = 1/223 (0%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 26028 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 25970
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
||||| || || || || | ||||| ||||| ||| |||||| | | || ||
Sbjct 25969 ACTGAAGGAATCAGCGCGTCCTACACCTGGGCCGAGAGGCTCGGGTAACCCACTGAACCT 25910
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
| ||||| | ||||| | | |||||||| || | | | |||||||||| || ||||||
Sbjct 25909 CCTTCGTGATAGGGATCGGGGCTTGCAATTTTTCCCCGTGAACGAGGAATTCCCAGTAAG 25850
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||| ||||| ||| ||||||||||||||||||||||||||||
Sbjct 25849 CGCGAGTCATAAGCTCGCGTTGATTACGTCCCTGCCCTTTGTA 25807
Score = 201 bits (222), Expect = 2e-49
Identities = 203/259 (78%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||| |||||||| |||| |||||||| || | ||||| ||||||||||||||||
Sbjct 72053 CTTCTCAGAGGGACAGACGGCGTCAAGCCGTACGA-GATTGAG-CAATAACAGGTCTGTG 71996
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC-ATC 189
||||||| |||||||||||||||||||||||||||||||| || || || || | ||
Sbjct 71995 ATGCCCTCAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCGCGTCCTATG 71936
Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249
||| ||||| ||| |||||| | | || ||| ||||| ||||| | | |
Sbjct 71935 CCCTGGGCCGAGAGGCTCGGGTAACCGCCTGAACCTCCTTCGTGACAGGGATCGGGGCCT 71876
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
|||||| || | | | |||||||||| || |||||||||| ||||| ||| |||| ||||
Sbjct 71875 GCAATTTTTCCCCGTGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGCTGAT 71816
Query 310 TACGTCCCTGCCCTTTGTA 328
|||||||||| ||||||||
Sbjct 71815 TACGTCCCTGTCCTTTGTA 71797
Score = 107 bits (118), Expect = 4e-21
Identities = 106/136 (78%), Gaps = 1/136 (1%)
Strand=Plus/Minus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2585 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 2527
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
||||| || | || | | |||| ||||| ||| |||||| | | || ||
Sbjct 2526 ACTGAAGGAATTAGCGCATCCTATACCTGGGCCGAGAGGCTCGGGTAACCCACTGAACCT 2467
Query 226 CTGTCGTGCTGGGGAT 241
| ||||| | |||||
Sbjct 2466 CCTTCGTGATAGGGAT 2451
Score = 93.3 bits (102), Expect = 8e-17
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 208 GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAA 267
|||||| | | || ||| ||||| ||||| | | ||||||| || | | | ||
Sbjct 75634 GGGTAACCGCCTGAACCTCCTTCGTGACAGGGATCGGGGCCTGCAATTTTTCCCCGTGAA 75575
Query 268 CGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGT 327
|||||||| || |||||||||| ||||| ||| |||| |||||||||||||| |||||||
Sbjct 75574 CGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGCTGATTACGTCCCTGTCCTTTGT 75515
Query 328 A 328
|
Sbjct 75514 A 75514
>seq122
Length=332499
Score = 87.8 bits (96), Expect = 3e-15
Identities = 66/78 (85%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
|||||| || | | |||||||||| || ||| |||||| ||||| ||| |||||||||
Sbjct 169458 GCAATTTTTTTCCGTGAACGAGGAATTCCCAGTGAGCGCGAGTCATAAGCTCGCGTTGAT 169399
Query 310 TACGTCCCTGCCCTTTGT 327
||||||||||||||||||
Sbjct 169398 TACGTCCCTGCCCTTTGT 169381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 945665649664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |