Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq204 91.5 1e-13 seq2183 86.0 5e-12 seq1649 86.0 5e-12 >seq204 Length=278841 Score = 91.5 bits (100), Expect = 1e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 61297 TGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTC 61356 ||||||||||| |||||||| || ||||||||||| ||||| || ||||| ||| | ||| Sbjct 82488 TGTTTCTACGGGTTCCAGATAGCAATGGAGAATGTTCACTCTGAAATGTATAGTTTACTC 82547 Query 61357 ATCGATACGTACATCAGGGA 61376 ||||| || ||||||| ||| Sbjct 82548 ATCGACACCTACATCAAGGA 82567 >seq2183 Length=46817 Score = 86.0 bits (94), Expect = 5e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 66785 TTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATC 66844 ||||||||||| ||| ||||||| |||| |||||||||||| || | |||| || ||| Sbjct 12410 TTGTACGTCTCAATGGCAGCATCTATGTCTTCGCCATGAATGCCAACTGCAACTCTCATG 12469 Query 66845 AGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCC 66904 || | || ||| || || || || | ||| | ||| | | ||| | |||||| | ||| Sbjct 12470 AGCATGTGTTGGGGTCGCTCTACGACGCGACCGTTGTTCTTCATCAGGTAGGACCTCTCC 12529 Query 66905 AGGGTCT 66911 || |||| Sbjct 12530 AGAGTCT 12536 >seq1649 Length=69447 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/204 (70%), Gaps = 6/204 (3%) Strand=Plus/Minus Query 66275 TCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACA 66334 || ||||| | | | || ||| || |||||||| ||| | | |||| || || Sbjct 3837 TCCGACAGGCCTCGGCAGGTGTTGGGGCACATCAGACTCCACTGAGCATCACTCTCCACG 3778 Query 66335 CGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCC 66394 || | ||| ||| || |||||||| ||| ||||||| || || || || || ||| Sbjct 3777 CGTCTCATGAATTCGTCCGGTATCCACAGGCCGTAGAACAGGTCCCGCGCGCGGAACTCT 3718 Query 66395 TCAATGCCG---TGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGT 66451 || ||||| | || ||| || |||||||| || || |||||| | ||||| || Sbjct 3717 TCCTTGCCGGTGTTCTTCTTGAGC---TCGAGGAAGTCGAAAATGTCGCCGTGCCACGGC 3661 Query 66452 TCCAGGTAGATGGCGAACGAGCCC 66475 ||||| ||||||||||| | |||| Sbjct 3660 TCCAGATAGATGGCGAAAGCGCCC 3637 Score = 82.4 bits (90), Expect = 6e-11 Identities = 127/180 (71%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 66299 GGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATC 66358 || |||||||| ||| | | |||| || || || | ||| ||| || |||||| Sbjct 2590 GGGCACATCAGACTCCACTGAGCATCACTCTCCACGCGTCTCATGAATTCGTCCGGTATC 2531 Query 66359 CAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCG---TGATTTTTGCGC 66415 || ||| ||||||| || || || || || ||| || ||||| | || ||| || Sbjct 2530 CACAGGCCGTAGAACAGGTCCCGCGCGCGGAACTCTTCCTTGCCGGTGTTCTTCTTGAGC 2471 Query 66416 AAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCC 66475 |||||||| || || |||||| | ||||| || ||||| ||||||||||| | |||| Sbjct 2470 ---TCGAGGAAGTCGAAAATGTCGCCGTGCCACGGCTCCAGATAGATGGCGAAAGCGCCC 2414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396783109824320