Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq3282 96.9 5e-15 seq1728 96.9 5e-15 >seq3282 Length=20056 Score = 96.9 bits (106), Expect = 5e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142793 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAGT 142852 |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| | | Sbjct 2436 GGGGGTTTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAATT 2377 Query 142853 CCGTTATTCTCCACCA 142868 ||| || |||||||| Sbjct 2376 CCGATAACCTCCACCA 2361 Score = 96.9 bits (106), Expect = 5e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142793 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAGT 142852 |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| | | Sbjct 9816 GGGGGTTTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAATT 9757 Query 142853 CCGTTATTCTCCACCA 142868 ||| || |||||||| Sbjct 9756 CCGATAACCTCCACCA 9741 Score = 96.9 bits (106), Expect = 5e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142793 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAGT 142852 |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| | | Sbjct 16862 GGGGGTTTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAATT 16803 Query 142853 CCGTTATTCTCCACCA 142868 ||| || |||||||| Sbjct 16802 CCGATAACCTCCACCA 16787 >seq1728 Length=64960 Score = 96.9 bits (106), Expect = 5e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142793 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAGT 142852 |||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| | | Sbjct 43733 GGGGGTTTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAATT 43674 Query 142853 CCGTTATTCTCCACCA 142868 ||| || |||||||| Sbjct 43673 CCGATAACCTCCACCA 43658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690059098838880