Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5931 168 1e-39 seq12390 105 1e-20 >seq5931 Length=9056 Score = 168 bits (186), Expect = 1e-39 Identities = 205/273 (75%), Gaps = 10/273 (4%) Strand=Plus/Plus Query 36 CGCA-TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAG 94 |||| ||| ||| |||| |||| | | ||| | || |||||||| || ||||||||| Sbjct 4379 CGCAGTGCTCTTTACTGAGTGTCGAGTTGGGCCGGTACGTTTACTTTAAACAAATTAGAG 4438 Query 95 TGTTCAAAGCAGGC---CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGT 150 || | ||||||||| ||| || |||||| | |||||||||||| ||||||||| | Sbjct 4439 TGCTTAAAGCAGGCTATCTTCGCCTGAATACTGTGTGCATGGAATAATGGAATAGGACCT 4498 Query 151 GCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG---TAATGATTAATAGGGATAGTCGGG 207 |||||||||||| ||||||| | ||| | ||| |||||||||||||||| || ||| Sbjct 4499 -CGGTTCTATTTTATTGGTTT-TCGGAACCCCGAGGTAATGATTAATAGGGACAGATGGG 4556 Query 208 GGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGC 267 || | ||||| || ||||||||||||||||||| ||||| || || Sbjct 4557 GGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGGACAGAAGC 4616 Query 268 GAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 |||||| || |||| |||||||||||||||| Sbjct 4617 GAAAGCATTTGCCAAAAATGTTTTCATTAATCA 4649 >seq12390 Length=686 Score = 105 bits (116), Expect = 1e-20 Identities = 133/177 (75%), Gaps = 13/177 (7%) Strand=Plus/Minus Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99 ||| ||| |||| |||| | | ||| | || ||||||||||| ||||||||||| | Sbjct 177 TGCTCTTTACTGAGTGTCGAGTTGGGCCGGTACGTTTACTTTGAACAAATTAGAGTGCTT 118 Query 100 AAAGCAGGC---CTTTGCTCGAATA-CATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 ||||||||| |||||| ||| | | |||||||||||| || |||||| | |||| Sbjct 117 AAAGCAGGCTATCTTTGCCTGAAAATTGTGTGCATGGAATAATGGATTAGGACCT-CGGT 59 Query 156 TCTATTTTGTTGGTTTCTAGGA---CCGCCGTAATGATTAATAGGGATAGTCGGGGG 209 |||||||| | |||| ||| ||| ||||||||||||||||| || ||||| Sbjct 58 TCTATTTTAT---TTTC--GGAACCCCGAGGTAATGATTAATAGGGACAGATGGGGG 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915070746304