Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1685 149 2e-33 seq1347 127 7e-27 seq1686 109 2e-21 >seq1685 Length=27489 Score = 149 bits (164), Expect = 2e-33 Identities = 117/140 (84%), Gaps = 1/140 (1%) Strand=Plus/Minus Query 234 CGGCTCCCACTTATTCTACACCTCT-CAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 || ||||||||||| ||||||||| || ||| |||| | | | ||||||||||| Sbjct 22418 CGACTCCCACTTATGCTACACCTCGGCATGTCTCCGAACAATGCCRKATTAGAGTCAAGC 22359 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct 22358 TCAACAGGGTCTTCTTTCCCCGCTGATTTTTCCAAGCCTGTTGGCTTGGCTGTGGTTTCG 22299 Query 353 CTAGATAGTAGATAGGGACA 372 |||||||| ||||| ||||| Sbjct 22298 CTAGATAGGAGATAAGGACA 22279 Score = 125 bits (138), Expect = 2e-26 Identities = 72/74 (97%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 10435 AGTAGATACGGACAGTGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 10376 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 10375 GAGGCATTTGGCTA 10362 Score = 107 bits (118), Expect = 6e-21 Identities = 98/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| |||||||||||||||||||| Sbjct 22763 CTTTTGCTCTACGCGAGGTTTCCGTCCTCGCTGAGCTGGCCTTAGGACACCTGCGTTATT 22704 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATC--AACCCGGA 124 ||| |||||| | ||||||||| ||||||||||||||| | |||| || || |||| Sbjct 22703 TTTTGACAGATTTACCGCCCCAGTCAAACTCCCCACCTGGCGGTGTCCTCGGAATACGGA 22644 Query 125 TCG 127 ||| Sbjct 22643 TCG 22641 >seq1347 Length=41464 Score = 127 bits (140), Expect = 7e-27 Identities = 79/85 (93%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGG 347 ||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 34371 CAACCTCAACAGGGTCTTCTTTCCCCGCTGATTTTTCCAAGCCCGTTAGCTTGGCTGTGG 34430 Query 348 TTTCGCTAGATAGTAGATAGGGACA 372 ||||||||||||||||||||||||| Sbjct 34431 TTTCGCTAGATAGTAGATAGGGACA 34455 Score = 78.8 bits (86), Expect = 3e-12 Identities = 43/43 (100%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 24718 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 24760 >seq1686 Length=36928 Score = 109 bits (120), Expect = 2e-21 Identities = 62/63 (98%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32212 ACAGTGAGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 32271 Query 430 CTA 432 ||| Sbjct 32272 CTA 32274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635107823776