Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq16901 100 1e-18 seq17525 84.2 9e-14 >seq16901 Length=5509 Score = 100 bits (110), Expect = 1e-18 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 || || ||||||||| |||||||||||| | ||| ||| |||| ||| |||||| ||| Sbjct 5301 TGCTGTGACCCGAAATATGGTGAACTATACTTGATCAGGTTGAAATCAGGGGAAACCCTG 5360 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| | || | | |||||| ||||||||||||| ||| | ||| |||||||||||| Sbjct 5361 AAGGAAGACCGAAACNGTTCTGACGTGCAAATCGATTGTCTGAATTGAGTATAGGGGCGA 5420 >seq17525 Length=20403 Score = 84.2 bits (92), Expect = 9e-14 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| || | |||||| |||| |||| |||||| ||| ||| || |||||| Sbjct 2230 GAGTCGTGTTGCTTTATAGTGCAGCACTAAGTGGGTGGTAAACTTCATCTTAAACTAAAT 2171 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || | ||||||| ||| ||||||| | | ||||| || |||| ||| || | Sbjct 2170 ATAACCATGAGACCGGTAGTAAACAAGTATCCTAAGGGAAAGTTGTAAAGAACTCTGAAT 2111 Query 160 AGAGAGTTAAAAAG 173 ||||||||||| || Sbjct 2110 AGAGAGTTAAATAG 2097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079434706700