Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq2675 107 2e-21 seq10543 73.4 4e-11 >seq2675 Length=5875 Score = 107 bits (118), Expect = 2e-21 Identities = 133/179 (74%), Gaps = 5/179 (3%) Strand=Plus/Plus Query 7 CGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGG 66 |||||||||||| ||| || ||||||| |||||||||| || |||||||||||| | || Sbjct 5334 CGGTGGATGCCTTGGCACTAAGAGGCGATGAAGGACGTGGTACGCTGCGAAAAGCCATGG 5393 Query 67 GGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAG 126 ||| || | | | ||||||||| ||| ||||||||||||||||| | | | Sbjct 5394 GGAGCCGCGAACAGGCTTTGATCCGTGGATGTCCGAATGGGGCAACCCCCTCGCAAGAGG 5453 Query 127 ATATATCA--TAACGC-TAGGCGT--TAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180 || ||| || | |||| || |||| ||| ||||||||||||||||| |||| Sbjct 5454 ATCCCTCACTGAATACATAGGTGTGGGAGGCAAACCCGGGGAACTGAAACATCTCAGTA 5512 >seq10543 Length=2957 Score = 73.4 bits (80), Expect = 4e-11 Identities = 69/88 (78%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 27 GGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGGGATTGGCACATACGAATTG 86 |||||||| ||||||||| | ||||||||||| | ||||| || | | |||| Sbjct 2804 GGAGGCGACGAAGGACGTAGCACGCTGCGAAAAGTTGTGGGGAGCCGCGAGCAGGCATTG 2863 Query 87 ATCCGTAGATATCCGAATGGGGCAACCC 114 ||||| | |||||||||||||||||||| Sbjct 2864 ATCCGCAAATATCCGAATGGGGCAACCC 2891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476678270874