Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= AAMG01001545.1 Length=359 Score E Sequences producing significant alignments: (Bits) Value seq5285 138 2e-30 seq14191 114 3e-23 >seq5285 Length=151634 Score = 138 bits (152), Expect = 2e-30 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 18 CGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAATACATGTAGCACACGTAA 77 ||||| || |||| ||| || ||||| || || ||||||| |||||||||||| | ||| Sbjct 4629 CGCAGGGCGGGCATGATATTTACGTTGGGTGAGGCCTTGGCATACATGTAGCAGGCATAA 4570 Query 78 CCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGCCATAGGGGTTGGTGTAC 137 | |||||| | || |||||||| ||||| ||||||||||||||||| ||||| || || Sbjct 4569 TCACTGCAATAGCCACAGAAGTTACACGGACCCATCTGCGCGCCATACGGGTTTGTATAG 4510 Query 138 GGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAACCGACCTCGGCAGCGGCT 197 ||| || | |||||| | |||| | ||| || | || ||| |||| || ||||| Sbjct 4509 GGCTGGGACGCATTGGCGGCGGGCATGGCGTAAGGGTGATACCCGGCCTCTGCTGCGGCA 4450 Query 198 TTCTGAAACAGCTGTGCGG 216 | | ||||| || |||| Sbjct 4449 TGGCGGAACAGATGCGCGG 4431 >seq14191 Length=7947 Score = 114 bits (126), Expect = 3e-23 Identities = 133/184 (72%), Gaps = 17/184 (9%) Strand=Plus/Minus Query 13 CCTGGCGCAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAATACATGTAGCACA 72 |||| |||||||| || || |||||||| |||||||||||||| ||||||||||| Sbjct 4022 CCTGACGCAGCGCAGGGAGAATGTTCACATTCGGCGAAGCCTTCGAATACATGTAN---- 3967 Query 73 CGTAACCGCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGCCATAGGGGTTGG 132 | | |||||||| |||||||| ||||||||||| ||||| || |||| Sbjct 3966 -------------ATATCCGCAGAAATTGCACGGCCCCATCTGCGCACCATACGGATTGG 3920 Query 133 TGTACGGCCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAACCGACCTCGGCAG 192 |||| || |||| | ||| || | ||||| || || | |||||| || ||||| Sbjct 3919 TGTATTGCGCCGACGCATTCGCAGCAGGCAGCGCATACGGGTGGTAACCCACGCTGGCAG 3860 Query 193 CGGC 196 |||| Sbjct 3859 CGGC 3856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046124231744