Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq10426 102 2e-19 seq2675 87.8 4e-15 >seq10426 Length=48752 Score = 102 bits (112), Expect = 2e-19 Identities = 62/66 (94%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 23 TCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTG 82 |||||| ||||||||||| |||| |||||||||||||||||||| ||||||||||||||| Sbjct 48336 TCTTCACACACGCGGCATTGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTG 48277 Query 83 CTGCCT 88 |||||| Sbjct 48276 CTGCCT 48271 >seq2675 Length=5875 Score = 87.8 bits (96), Expect = 4e-15 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 23 TCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTG 82 |||||| ||||||||||| |||| |||||| || | |||||||| ||||||||||||||| Sbjct 3824 TCTTCACACACGCGGCATTGCTGGATCAGGGTTTCCCCCATTGTCCAATATTCCCCACTG 3765 Query 83 CTGCCT 88 |||||| Sbjct 3764 CTGCCT 3759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222077848704