Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq10426 84.2 7e-14 seq2675 78.8 3e-12 >seq10426 Length=48752 Score = 84.2 bits (92), Expect = 7e-14 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 274 AGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAG 333 ||||||||||||||||||||| ||||||||| ||||||||| |||||| |||||||| | Sbjct 48271 AGGCAGCAGTGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGTG 48330 Query 334 CGATGA 339 || || Sbjct 48331 TGAAGA 48336 >seq2675 Length=5875 Score = 78.8 bits (86), Expect = 3e-12 Identities = 57/66 (86%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 274 AGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAG 333 ||||||||||||||||||||| |||||||| ||| |||||| |||||| |||||||| | Sbjct 3759 AGGCAGCAGTGGGGAATATTGGACAATGGGGGAAACCCTGATCCAGCAATGCCGCGTGTG 3818 Query 334 CGATGA 339 || || Sbjct 3819 TGAAGA 3824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497205322496