Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq23911 351 2e-94 >seq23911 Length=2931 Score = 351 bits (388), Expect = 2e-94 Identities = 264/307 (86%), Gaps = 4/307 (1%) Strand=Plus/Plus Query 23 CGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGG 82 ||||||||||||||||||||||| || || | || || | | ||||||||||| Sbjct 2598 CGAGACCTTAACCTGCTAAATAGGGCTGCGAGCATCTGCTTGTGGGCT-CTTCTTAGAGG 2656 Query 83 GACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGA 141 |||||| || |||| || ||||||||||||||||| ||||||||||||||||||||||| Sbjct 2657 GACTATGGGTATCAAACCCATGGAAGTTTGAGGCAACAACAGGTCTGTGATGCCCTTAGA 2716 Query 142 TGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGA 201 ||||||||||||||||||||||||||||| |||||| | ||| || ||||||| || Sbjct 2717 CGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCAAGTACA--ACCTTGGTCGAG 2774 Query 202 AGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCT 261 ||| | ||||||||| || |||||| ||||||||||||||||||||||| |||| ||||| Sbjct 2775 AGGCCCGGGTAATCTCGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTTTTGCT 2834 Query 262 CTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCC 321 |||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||| Sbjct 2835 CTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCC 2894 Query 322 CTTTGTA 328 ||||||| Sbjct 2895 CTTTGTA 2901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946950374912