Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq2675 116 7e-24 seq10543 93.3 8e-17 >seq2675 Length=5875 Score = 116 bits (128), Expect = 7e-24 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | | |||||||||||||||| ||| ||||| |||| ||| Sbjct 5335 GGTGGATGCCTTGGCACTAAGAGGCGATGAAGGACGTGGTACGCTGCGAAAAGCCATGGG 5394 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 ||| || |||| |||||||||| ||| ||||||||||| ||||| | | | Sbjct 5395 GAGCC-GCGAACAGGCTTTGATCCGTGGATGTCCGAATGGGGCAACCCCCTCGCAAGAGG 5453 Query 130 CATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTA 189 || | |||||||||||||| || | || ||| ||| |||||||||||||| |||| Sbjct 5454 -ATCCCTCACTGAATACATAGGTGTGGGAGGCAAACCCGGGGAACTGAAACATCTCAGTA 5512 Query 190 GCT 192 || Sbjct 5513 CCT 5515 Score = 109 bits (120), Expect = 1e-21 Identities = 84/100 (84%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 139 CTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGA 198 |||||||||||||| | | || ||| ||| |||||||||||||| |||| ||| |||| Sbjct 5552 CTGAATACATAGGTGTATGAGGCAAACCCGGGGAACTGAAACATCTCAGTACCTGGAGGA 5611 Query 199 AAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||||| |||||| |||||||| |||||||||||||||| Sbjct 5612 AAAGACATCAACAGAGATTCCGCTAGTAGTGGCGAGCGAA 5651 >seq10543 Length=2957 Score = 93.3 bits (102), Expect = 8e-17 Identities = 120/158 (76%), Gaps = 12/158 (8%) Strand=Plus/Plus Query 31 AGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGA 90 |||||| ||||||||||| | ||||| ||| || |||||| || | || | |||| Sbjct 2806 AGGCGACGAAGGACGTAGCACGCTGCGAAAAGTTGTGGGGAGCC-GCGAGCAGGCATTGA 2864 Query 91 TCCGCAGATTTCCGAATGGGGAAACCCGGCC--CTTTGGG--TCATTGCATGCTGAATAC 146 |||||| || ||||||||||| ||||| || | |||| |||| ||| |||||||| Sbjct 2865 TCCGCAAATATCCGAATGGGGCAACCCACCCAGCGATGGGTATCAT--CAT-CTGAATAC 2921 Query 147 ATAGG--TATGCAAAGCGAACGCGGCGAACTGAAACAT 182 ||||| ||| | |||||| ||| |||||||||||| Sbjct 2922 ATAGGGTGATG--AGGCGAACCCGGGGAACTGAAACAT 2957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918157964864