Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq23573 91.5 5e-16 seq22531 86.0 2e-14 >seq23573 Length=3046 Score = 91.5 bits (100), Expect = 5e-16 Identities = 68/77 (88%), Gaps = 2/77 (3%) Strand=Plus/Minus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 || |||| || |||||||| | ||||||||||||||| |||||||||||||||| ||| | Sbjct 1744 GAGAGTAAATGGGGACAGTAGTAATCTCGTTAATCCAATCATGCGCGTCACTAA-TAG-T 1687 Query 416 GACGAGGCATTTGGCTA 432 ||| ||||||||||||| Sbjct 1686 GACAAGGCATTTGGCTA 1670 >seq22531 Length=2555 Score = 86.0 bits (94), Expect = 2e-14 Identities = 52/55 (95%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||||||||| ||||||||| || ||||||||||||||||||||||||||| Sbjct 2015 TAGATAGGGACAGTAGGAATCTCGCTACTCCATTCATGCGCGTCACTAATTAGAT 2069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634769059392