Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq25128 540 8e-149 seq19105 394 7e-105 >seq25128 Length=30855 Score = 540 bits (598), Expect = 8e-149 Identities = 1250/1863 (67%), Gaps = 57/1863 (3%) Strand=Plus/Minus Query 65080 GACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTT 65139 ||| ||||| || || ||||| ||||| | ||| || | ||||| ||||| || ||||| Sbjct 20191 GACTGTGAATTGAATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCTGTCTT 20132 Query 65140 GAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGC 65199 |||||| || ||| | ||||||| || |||| ||| || | || || || ||||| Sbjct 20131 GAGGCCTGCCTTCCACGAGAAGAAATGAATGGATGTTAACTTGCCGTAGTTGGGTTCGGC 20072 Query 65200 CACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTC 65259 || || || || || || |||||||| || || || ||| ||||| || ||||| | Sbjct 20071 AACGTGAATGTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCCATCTT 20012 Query 65260 AATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTG 65318 ||| | ||| || |||| || ||||||||||| ||||| || ||||| || | Sbjct 20011 GATGGTT-GACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACTTCCTGAG 19953 Query 65319 GAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACT 65378 |||| || |||| || | || ||||||| ||||| || |||| ||| | Sbjct 19952 GAATGGATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCATGTCAT 19893 Query 65379 CTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACT 65438 | ||| ||| ||| ||| | | || | | ||| ||| |||| | || | ||||| Sbjct 19892 CATCCCATAAATCCAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTGAACT 19833 Query 65439 CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGT 65498 | ||||||| || || | | || ||||| || || || |||||||| ||| | | Sbjct 19832 CTCCGGACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCATTAT 19773 Query 65499 TGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC--- 65555 | || | || |||||||||||||| || ||||| ||||| || | || ||||||| Sbjct 19772 TACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCCACAAGCAGCGAGTTTCTAA 19713 Query 65556 -GCAATCCG--TTCATTT-CAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || || | || |||| |||| || || ||| | ||| | ||| | ||||| Sbjct 19712 CGCCATGCTCTTTGATTTTCAATTTTA-GA-GCAGT-----CCAATCCCAAA--GGTTTG 19662 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 | | | | | | ||||||||| | ||||| |||| | || |||| |||| Sbjct 19661 TGGGTGTCTT----GTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCA 19606 Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731 | | | || || || |||| | || || | ||| |||| ||| || || || Sbjct 19605 GCGTAGGTTTCATAGGGACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCA 19546 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTC-ACGTGCCTCATCGCTCTCGTACGG 65790 | || ||||| ||||| || | |||| || ||| || | || ||||| || || Sbjct 19545 TAGTAGATGGTTTCGAAGATCTGCTGATTGAGCAATACG-GCTTTGTCACTCTCATAGGG 19487 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 | | |||||| | || | |||||| | || ||||| ||||| || ||||||||||| Sbjct 19486 AAAGCGCATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATG 19427 Query 65851 ACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 | |||||||| | ||||| || | || |||||||||||||| || || || Sbjct 19426 TCTTAAATTGGATTTCTTTGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTT 19367 Query 65911 CAAATTGCGTGTCACCACATGCACGATACGTCGC--AATTGTTCGAAATCAAAATGTTTA 65968 |||||| | || || | | | | || || | || | |||||| || ||||| Sbjct 19366 CAAATTTCTGGTGAC-AGTTTTAGTA-ACTTCCTTTAGTTTCTTGAAATCGAA-TGTTTT 19310 Query 65969 GGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028 || | ||| ||||||| | | ||| | ||||| | |||||| Sbjct 19309 C-----TCTGAAGT---------CACAAACATATTCAAGGCTATCGATGCCAAATTGCAG 19264 Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088 || || ||||| || || || | ||| || |||||||||||||| || || ||||| Sbjct 19263 ACGGCAATCTCATCGGGTGCCGAATATTCAACAATTTCGGTGCAGAGGTTGCTGCATTTG 19204 Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 |||||||| | |||||| ||||| ||||| | ||||| | || ||| | | ||||||| Sbjct 19203 ATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTCTTTGAAGAGCATGTAC 19144 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 |||||||| ||||||||||| || |||| ||||| | |||||||| |||| || | | Sbjct 19143 GGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAAGAGTTTGTGCTTTAATC 19084 Query 66209 GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 ||| || | ||| | || || || | | || || | || ||| || ||| Sbjct 19083 ACACGATTTGCGCGACCCTCGCTCTCATACTTTGTATACAGCTTCTCAAAGTCATCCCCC 19024 Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || || || || | ||||||||||| ||||||| |||||||||||| ||| | Sbjct 19023 CAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAGCGACCAATCCTCATTGGCT 18964 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || ||||| |||||| ||||| |||||||| | ||||||||||||||| || |||| Sbjct 18963 TCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTAGAAGAGATCACGAGCTCTG 18904 Query 66389 TGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 ||||| || |||| ||| | ||| | | ||| | |||||||||||| |||| |||||| Sbjct 18903 TGCTCTTCCTTGCCCGTGTTCTTTTTG-AGGTCCAAGAACTCAAAGATATCGGAATGCCA 18845 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 ||||||||||| ||||| || | ||| || |||||||||||||| ||||| || || Sbjct 18844 AGGTTCCAGGTAAATGGCAAAAGCGCCTGGCCGCTTGCCGCCACCTTGATCGACATAACG 18785 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| ||||| || || || | | ||| || || | || || || ||||||| ||||| Sbjct 18784 AGCCACATTATTAAACACTCTGAGCATGGGCACCAAACCATTTGAAGTGCCATTAGTGCC 18725 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 ||| | || || || || ||| || ||||| || ||||| ||||| || | Sbjct 18724 ACAGATCGAGGTGCCCTTGGCACGAATACAATGCACATTGAGTCCAATGCCACCAGCGGA 18665 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTC---ACC 66684 || ||||| ||||| | | || | | ||| ||||| || ||||| || | | Sbjct 18664 TTTGGAGATCATTGCACACTGCTCGACGGACTTGAAAATGCCTTCGATGGAATCGGAAAC 18605 Query 66685 CTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGG---GTTTGGGTGTGGCGGCCGAGAA 66741 | || || || ||| | || || | |||| | ||| ||||| || | || Sbjct 18604 C---ATTGTTAGAAGGAAACACGATGACATCTGGGGACGATTG---GTGGCAGCAGCAAA 18551 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 || || || | || |||||||| || | || | |||||| ||||||| | Sbjct 18550 TAGCGTTGGCGATGCATGCGTAAAATAGCGTTCCGATAACAGATTGTAAGTCTCGACAGC 18491 Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCG 66861 | ||| |||| ||||||||| || || | || || |||||| | || || || || Sbjct 18490 GGAATCGATGTCTTCGCCATGGATTCCAATCGCCACTCTCATCAGCATGTGCTGCGGACG 18431 Query 66862 TTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAA 66921 |||| | | | ||||| | | || || || || || |||||||||| ||||| Sbjct 18430 TTCGGCGATTTTGCCATTGATCTTTAGCAAATACGAACGCTCGAGGGTCTTGAAGCCAAA 18371 Query 66922 GTA 66924 || Sbjct 18370 ATA 18368 >seq19105 Length=237168 Score = 394 bits (436), Expect = 7e-105 Identities = 603/850 (71%), Gaps = 21/850 (2%) Strand=Plus/Minus Query 61103 AAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATG 61162 || |||| ||||| || |||||||| || || || || ||| ||||||| ||||||| || Sbjct 37450 AACAGGCTGAAGCATCGTTCTGGACCGTCGAAGAAGTGGATCTGTCCAAGGACATGACTG 37391 Query 61163 ACTGGG---AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCT 61219 | |||| ||| ||| || ||| | |||||||| ||||||||||| |||| Sbjct 37390 ATTGGGCCAAGC--TTACGGATAA-TGAGCGTCATTTCATATCGCATGTGTTGGCCTTCT 37334 Query 61220 TTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGC 61279 |||| ||||| || || || || || || ||| | | |||||||| || || |||| Sbjct 37333 TTGCTGCTTCTGATGGAATTGTTAACGAAAATCTGGTCGAACGTTTTAGCCAAGAAGTGC 37274 Query 61280 AAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGG 61339 | ||| | ||||| ||||| || || |||||||||||||||||||||||||| || || | Sbjct 37273 AGGTGACCGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATGTGCATTCCG 37214 Query 61340 AGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGAT-TG 61398 | ||||||||||| ||||| || || || |||||||| | | || | || || | Sbjct 37213 AAATGTACAGTGTGCTCATTGACACCTATATCAGGGATCCTCATCAGCGAG-ACTATCTC 37155 Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 ||||||||||| || ||||| ||||| || |||||||| || || ||||| | |||| Sbjct 37154 TTCAATGCCATTGAAACGATGCCGGCTGTTAAGCGGAAGGCAGACTGGGCTCTTTCTTGG 37095 Query 61459 ATCACCAGTACAACGGCT---ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||| | | | | |||| | ||||||||||| | | || ||||| | || || Sbjct 37094 ATCTC---TTCGAAGGCTGCCAACTTTGGTGAACGTATTATTGCTTTTGCTGCTGTTGAA 37038 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || | || |||||||| ||||| | ||||| ||| ||||||| |||||||||||| Sbjct 37037 GGCATCTTCTTCAGTGGGAGCTTTGCATCCATCTTCTGGCTGAAGAAGCGTGGACTTATG 36978 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635 || || || || ||| ||| || ||||| || ||||| || || |||||||||| ||| Sbjct 36977 CCTGGACTTACATTCTCCAACGAATTGATCTCTCGCGATGAAGGTCTGCATTGTGACTTT 36918 Query 61636 GCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTG 61693 || || | | ||| ||| || ||||| | || || |||| ||| || | || Sbjct 36917 GCGGTGCTTATGTTCCAAC---ATTTGGTGCAGCGGCCTAGTCG--GGAACGCATCATTG 36863 Query 61694 AGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT 61753 | || | || || || ||||| || ||||| || || || || || |||||||| Sbjct 36862 AAATCATAACGGATGCTGTGACTATTGAGCAGGAGTTCCTCACCGATGCGCTGCCCGTCA 36803 Query 61754 CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTC 61813 | || |||||||| |||| || ||||| | ||||| || ||||| || || || | Sbjct 36802 ACTTGATTGGCATGAACTGTGCTCTGATGTCCGAATATATCGAGTTTGTCGCTGATCGCC 36743 Query 61814 TGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGG 61873 | ||||| || | || || ||| || || || || || ||||| ||||||| Sbjct 36742 TATTGGTTGAGCTTGGCGTGGGCAAGATTTACAACACAAAGAATCCATTCTCGTTCATGG 36683 Query 61874 ACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAAC 61933 | ||||| || |||||||||| || || || |||||||| || || || ||||| | Sbjct 36682 AGATGATCTCTTTGGATGGCAAAACCAACTTCTTCGAGAAGAAAGTGGGTGAATATCAGC 36623 Query 61934 GTTTGGGTGT 61943 | |||| || Sbjct 36622 GCATGGGAGT 36613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397440305382560